Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.7□□□□□ -2.3
CASQ1P31415 AC048334.1-201ENST00000477975 159 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 RPS23P5-201ENST00000495419 428 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 HSPE1P23-201ENST00000509838 286 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 AC067942.3-201ENST00000512025 362 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 EIF4A1P12-201ENST00000551910 141 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 AC090888.2-201ENST00000559765 1144 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.7□□□□□ -2.3
CASQ1P31415 MIR3118-1-201ENST00000581787 76 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 AC105148.1-201ENST00000604961 409 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 Z69720.2-201ENST00000624755 279 ntBASIC0.7□□□□□ -2.3
CASQ1P31415 AL391994.1-201ENST00000254724 282 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 RNA5SP361-201ENST00000362686 118 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 MTATP6P20-201ENST00000414147 562 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.69□□□□□ -2.3
CASQ1P31415 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.69□□□□□ -2.3
CASQ1P31415 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 MTND2P31-201ENST00000512602 616 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 AC112206.4-201ENST00000515142 405 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 RNU6-377P-201ENST00000515965 102 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 AC022616.6-201ENST00000520479 119 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.69□□□□□ -2.3
CASQ1P31415 MIR4742-201ENST00000581069 85 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 MIR3945-201ENST00000581853 98 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 BNIP3P16-201ENST00000589779 534 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 AC080013.3-201ENST00000606839 578 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 AL157786.1-207ENST00000627771 695 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 MIR338-201ENST00000636369 67 ntBASIC0.69□□□□□ -2.3
CASQ1P31415 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CASQ1P31415 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.68□□□□□ -2.3
CASQ1P31415 AC011233.1-201ENST00000422812 283 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.68□□□□□ -2.3
CASQ1P31415 AC137499.1-201ENST00000427602 88 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 AC000111.3-201ENST00000433478 193 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
CASQ1P31415 AC007547.1-201ENST00000462177 490 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.68□□□□□ -2.3
CASQ1P31415 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.68□□□□□ -2.3
CASQ1P31415 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.68□□□□□ -2.3
CASQ1P31415 AC136475.10-201ENST00000620253 385 ntBASIC0.68□□□□□ -2.3
CASQ1P31415 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.68□□□□□ -2.3
CASQ1P31415 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.68□□□□□ -2.3
CASQ1P31415 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CASQ1P31415 RNU6-1257P-201ENST00000384625 110 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.67□□□□□ -2.3
CASQ1P31415 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.67□□□□□ -2.3
CASQ1P31415 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.67□□□□□ -2.3
CASQ1P31415 RPL22P17-201ENST00000438729 315 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 AC245047.7-201ENST00000440265 293 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 SNRPFP4-201ENST00000456366 242 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 RNU2-34P-201ENST00000516534 121 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.67□□□□□ -2.3
CASQ1P31415 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.67□□□□□ -2.3
CASQ1P31415 AL513534.2-201ENST00000603836 250 ntBASIC0.67□□□□□ -2.3
CASQ1P31415 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.67□□□□□ -2.3
CASQ1P31415 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.67□□□□□ -2.3
CASQ1P31415 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.67□□□□□ -2.3
CASQ1P31415 AC092268.1-201ENST00000342691 405 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 Y_RNA.97-201ENST00000363094 102 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 RNU4-1-201ENST00000363925 141 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 MIR764-201ENST00000390811 85 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 RNU2-3P-201ENST00000410144 191 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.66□□□□□ -2.3
CASQ1P31415 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.66□□□□□ -2.3
CASQ1P31415 Z73417.1-201ENST00000447373 778 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 MTND1P18-201ENST00000448191 573 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.66□□□□□ -2.3
CASQ1P31415 BET1P1-201ENST00000482276 359 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.66□□□□□ -2.3
CASQ1P31415 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.66□□□□□ -2.3
CASQ1P31415 MTND3P25-201ENST00000509243 135 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 HSPE1P4-201ENST00000550617 308 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 TMF1P1-201ENST00000576058 373 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 AC073539.2-201ENST00000597113 165 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 AL356157.2-201ENST00000605122 111 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 AC021506.2-201ENST00000612354 169 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CASQ1P31415 BX322639.1-202ENST00000423987 2213 ntBASIC0.65□□□□□ -2.3
CASQ1P31415 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.65□□□□□ -2.31
CASQ1P31415 MIR378A-201ENST00000362177 66 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 SNORA33-201ENST00000363664 130 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 RNU6-39P-201ENST00000384344 107 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 MIR1261-201ENST00000408659 82 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 RNU6-607P-201ENST00000411283 108 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CASQ1P31415 RPL23AP95-201ENST00000426806 265 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 AC073614.1-201ENST00000438690 650 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms