Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
HOXC8P31273 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
HOXC8P31273 AL161431.1-201ENST00000618966 4205 ntBASIC2.54□□□□□ -2
HOXC8P31273 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.54□□□□□ -2
HOXC8P31273 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXC8P31273 SNORD114-1-201ENST00000362705 72 ntBASIC2.54□□□□□ -2
HOXC8P31273 RNA5SP240-201ENST00000365355 128 ntBASIC2.54□□□□□ -2
HOXC8P31273 Y_RNA.387-201ENST00000383918 102 ntBASIC2.54□□□□□ -2
HOXC8P31273 RPL37P10-201ENST00000412884 288 ntBASIC2.54□□□□□ -2
HOXC8P31273 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.54□□□□□ -2
HOXC8P31273 MTND1P17-201ENST00000448961 204 ntBASIC2.54□□□□□ -2
HOXC8P31273 Y_RNA.635-201ENST00000459041 101 ntBASIC2.54□□□□□ -2
HOXC8P31273 AC073901.1-201ENST00000462471 408 ntBASIC2.54□□□□□ -2
HOXC8P31273 AC130509.1-201ENST00000464158 433 ntBASIC2.54□□□□□ -2
HOXC8P31273 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
HOXC8P31273 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC8P31273 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.54□□□□□ -2
HOXC8P31273 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
HOXC8P31273 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.54□□□□□ -2
HOXC8P31273 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.54□□□□□ -2
HOXC8P31273 FRG2DP-202ENST00000566967 323 ntBASIC2.54□□□□□ -2
HOXC8P31273 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
HOXC8P31273 AC064836.2-201ENST00000609491 462 ntBASIC2.54□□□□□ -2
HOXC8P31273 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
HOXC8P31273 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
HOXC8P31273 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.54□□□□□ -2
HOXC8P31273 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXC8P31273 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
HOXC8P31273 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
HOXC8P31273 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
HOXC8P31273 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HOXC8P31273 Y_RNA.419-201ENST00000384041 102 ntBASIC2.53□□□□□ -2
HOXC8P31273 RNU6-843P-201ENST00000384454 104 ntBASIC2.53□□□□□ -2
HOXC8P31273 RNU6-95P-201ENST00000384697 107 ntBASIC2.53□□□□□ -2
HOXC8P31273 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.53□□□□□ -2
HOXC8P31273 RN7SKP158-201ENST00000410453 326 ntBASIC2.53□□□□□ -2
HOXC8P31273 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
HOXC8P31273 SNAP23P1-201ENST00000433229 246 ntBASIC2.53□□□□□ -2
HOXC8P31273 AL031274.1-201ENST00000450334 232 ntBASIC2.53□□□□□ -2
HOXC8P31273 Y_RNA.687-201ENST00000516558 91 ntBASIC2.53□□□□□ -2
HOXC8P31273 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXC8P31273 AL050343.2-201ENST00000607338 280 ntBASIC2.53□□□□□ -2
HOXC8P31273 AC010378.1-201ENST00000619270 362 ntBASIC2.53□□□□□ -2
HOXC8P31273 AC024581.2-201ENST00000619986 252 ntBASIC2.53□□□□□ -2
HOXC8P31273 MTND4LP32-201ENST00000636111 270 ntBASIC2.53□□□□□ -2
HOXC8P31273 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.53□□□□□ -2
HOXC8P31273 AC241585.2-209ENST00000638217 143 ntBASIC2.53□□□□□ -2
HOXC8P31273 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC8P31273 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC8P31273 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC8P31273 RBBP8P1-201ENST00000449447 1844 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 RNU6-1329P-201ENST00000365664 107 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 RNU6-306P-201ENST00000384617 107 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 MIR1289-2-201ENST00000408360 111 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 RNU6-370P-201ENST00000411008 104 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC8P31273 EIF4EP4-201ENST00000424916 578 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 MTND1P14-201ENST00000427400 950 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 snoU13.23-201ENST00000458863 104 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 AC096745.1-201ENST00000509945 370 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC8P31273 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC8P31273 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC8P31273 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC8P31273 AL121917.1-203ENST00000605534 577 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC8P31273 MIR6128-201ENST00000615528 109 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 AC090574.1-201ENST00000623186 233 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
HOXC8P31273 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC8P31273 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC8P31273 Y_RNA.259-201ENST00000364619 101 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 Y_RNA.460-201ENST00000384255 102 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 RNU6-1297P-201ENST00000384415 104 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 RNU6-601P-201ENST00000384540 107 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 SNORD56-201ENST00000413522 71 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC8P31273 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC8P31273 HMGN2P3-201ENST00000433603 273 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 RPS15AP28-201ENST00000435088 386 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 HMGN2P5-201ENST00000436882 273 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 RNU7-187P-201ENST00000458985 68 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC8P31273 HMGN1P13-201ENST00000505795 138 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 RNU6-1153P-201ENST00000516760 105 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AP005902.1-201ENST00000521358 186 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC8P31273 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC8P31273 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC8P31273 AC100830.2-201ENST00000581636 240 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AC023043.3-201ENST00000593113 385 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AL356055.1-201ENST00000602528 446 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
HOXC8P31273 AL355297.2-201ENST00000604792 129 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms