Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 Y_RNA.481-201ENST00000384373 102 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 SNORA12-201ENST00000391162 147 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 RN7SKP61-201ENST00000410642 295 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.83□□□□□ -2.12
PTPN6P29350 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.83□□□□□ -2.12
PTPN6P29350 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
PTPN6P29350 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
PTPN6P29350 TPTE2P5-203ENST00000458118 728 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 AC093259.1-201ENST00000509755 300 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 RNU6-189P-201ENST00000516120 101 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 SNORA31.16-201ENST00000516773 139 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.83□□□□□ -2.12
PTPN6P29350 AP005639.2-201ENST00000527592 928 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 AC104383.1-201ENST00000530297 370 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
PTPN6P29350 ANP32BP3-201ENST00000559213 706 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 MIR4424-201ENST00000585257 86 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.83□□□□□ -2.12
PTPN6P29350 Z99129.1-201ENST00000612510 255 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PTPN6P29350 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTPN6P29350 AC092268.1-201ENST00000342691 405 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 RNU4-66P-201ENST00000365199 138 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 RNU11-3P-201ENST00000391111 133 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 RNU2-66P-201ENST00000410650 161 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.82□□□□□ -2.12
PTPN6P29350 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.82□□□□□ -2.12
PTPN6P29350 BX510359.4-201ENST00000423750 193 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.82□□□□□ -2.12
PTPN6P29350 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.82□□□□□ -2.12
PTPN6P29350 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.82□□□□□ -2.12
PTPN6P29350 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.82□□□□□ -2.12
PTPN6P29350 MTND2P22-201ENST00000444325 1033 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.82□□□□□ -2.12
PTPN6P29350 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.82□□□□□ -2.12
PTPN6P29350 RNU6-261P-201ENST00000459506 102 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 SRRM1P2-201ENST00000464531 1192 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC083798.1-201ENST00000472671 131 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC016632.1-201ENST00000503994 196 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
PTPN6P29350 SNORA14.1-201ENST00000516113 141 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.82□□□□□ -2.12
PTPN6P29350 BNIP3P10-201ENST00000605360 577 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 OR5AK4P-201ENST00000635912 903 ntBASIC1.82□□□□□ -2.12
PTPN6P29350 Y_RNA.99-201ENST00000363138 105 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 SNORA69-201ENST00000383895 132 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 Y_RNA.504-201ENST00000384481 104 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 SNORD73A-201ENST00000386062 65 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 RNU6-482P-201ENST00000391068 107 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AL357139.1-201ENST00000407792 426 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AL030996.1-201ENST00000411430 235 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 UBE2V1P4-201ENST00000425374 344 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 USP9YP14-201ENST00000430663 563 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AL133396.1-201ENST00000432048 687 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.81□□□□□ -2.12
PTPN6P29350 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
PTPN6P29350 MTCO2P3-201ENST00000442543 421 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 MTND1P29-201ENST00000448112 647 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.81□□□□□ -2.12
PTPN6P29350 AC132942.1-201ENST00000486753 483 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 RNU6-1038P-201ENST00000516516 104 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 RNU2-44P-201ENST00000516795 194 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AP005660.1-201ENST00000522972 293 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 CENPUP1-201ENST00000526649 1202 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PTPN6P29350 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.81□□□□□ -2.12
PTPN6P29350 MIR3923-201ENST00000579521 83 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.81□□□□□ -2.12
PTPN6P29350 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
PTPN6P29350 AC092747.3-201ENST00000603769 301 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 CYP2C61P-201ENST00000604072 290 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AP001836.1-201ENST00000604675 523 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 AC025754.2-201ENST00000606491 432 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
PTPN6P29350 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
PTPN6P29350 RNU6-1085P-201ENST00000363576 107 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 RNU6-82P-201ENST00000363970 107 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 SNORD32B-201ENST00000364460 84 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PTPN6P29350 MIR1283-2-201ENST00000408621 87 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PTPN6P29350 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.8□□□□□ -2.12
PTPN6P29350 RPL23AP95-201ENST00000426806 265 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
PTPN6P29350 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.8□□□□□ -2.12
PTPN6P29350 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
PTPN6P29350 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.8□□□□□ -2.12
PTPN6P29350 AC109446.1-201ENST00000566172 220 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
PTPN6P29350 AL022345.1-201ENST00000607292 135 ntBASIC1.8□□□□□ -2.12
PTPN6P29350 AC009318.2-201ENST00000610917 651 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms