Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC002486.1-201ENST00000435098 391 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 AC104692.1-201ENST00000472406 90 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
HMGA1P17096 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 RNU6-528P-201ENST00000516926 100 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 AL391001.1-201ENST00000602747 715 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 AL118556.2-201ENST00000614375 824 ntBASIC-0.55□□□□□ -2.5
HMGA1P17096 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.55□□□□□ -2.5
HMGA1P17096 MTND4P5-201ENST00000435821 1374 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 ENSAP3-201ENST00000312710 333 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 MIR145-201ENST00000384967 88 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-747P-201ENST00000390928 104 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-241P-201ENST00000391148 104 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 CBX3P9-201ENST00000402326 552 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AL034345.1-201ENST00000407768 123 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 GPM6BP2-201ENST00000432046 144 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC104332.1-201ENST00000440471 797 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 GPM6BP1-201ENST00000446387 144 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.56□□□□□ -2.5
HMGA1P17096 RPL39P39-201ENST00000455840 151 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 MTCO3P10-201ENST00000455912 772 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RPS3AP17-201ENST00000472594 777 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC009646.1-201ENST00000510455 318 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-491P-201ENST00000516099 110 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.56□□□□□ -2.5
HMGA1P17096 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.56□□□□□ -2.5
HMGA1P17096 AC112693.2-201ENST00000556538 232 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC122134.1-202ENST00000569111 1201 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 MIR3136-201ENST00000583498 78 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC022022.2-201ENST00000602989 360 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC112187.2-201ENST00000604345 283 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 AC078938.1-201ENST00000620993 318 ntBASIC-0.56□□□□□ -2.5
HMGA1P17096 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.56□□□□□ -2.5
HMGA1P17096 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 RNU6-505P-201ENST00000384427 107 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 VPS26BP1-201ENST00000417155 755 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 MTATP6P16-201ENST00000434543 526 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.57□□□□□ -2.5
HMGA1P17096 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 SNRPEP8-201ENST00000442866 260 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.57□□□□□ -2.5
HMGA1P17096 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.57□□□□□ -2.5
HMGA1P17096 MTCO3P28-201ENST00000513351 515 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 SUB1P2-201ENST00000556401 297 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.57□□□□□ -2.5
HMGA1P17096 VN1R83P-201ENST00000595685 445 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 VN1R88P-201ENST00000596787 292 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 RNU6-94P-201ENST00000607728 107 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 AC006157.1-201ENST00000611750 366 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 AC136475.10-201ENST00000620253 385 ntBASIC-0.57□□□□□ -2.5
HMGA1P17096 RNU6-212P-201ENST00000362642 104 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 RNU6-674P-201ENST00000363831 107 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 MIR604-201ENST00000384880 94 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 AL603865.2-201ENST00000401679 213 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 Z99497.1-201ENST00000421282 135 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.58□□□□□ -2.5
HMGA1P17096 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.58□□□□□ -2.5
HMGA1P17096 MTND2P5-201ENST00000432656 1006 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.58□□□□□ -2.5
HMGA1P17096 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.58□□□□□ -2.5
HMGA1P17096 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 AC027419.1-201ENST00000522976 328 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HMGA1P17096 AC131055.1-201ENST00000584626 316 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 AC007363.1-201ENST00000604736 620 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 MIR8076-201ENST00000611401 83 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 SEC63P2-201ENST00000503863 1939 ntBASIC-0.58□□□□□ -2.5
HMGA1P17096 MIR340-201ENST00000362125 95 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 SNORA25.3-201ENST00000363205 127 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
HMGA1P17096 SNORD105-201ENST00000386910 85 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 RNU6-679P-201ENST00000391003 106 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 ARL5AP1-201ENST00000418991 388 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.59□□□□□ -2.5
HMGA1P17096 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.59□□□□□ -2.5
HMGA1P17096 AC003071.1-201ENST00000451219 789 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.59□□□□□ -2.5
HMGA1P17096 SNORD4A-201ENST00000459174 72 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 RPL37P6-201ENST00000460682 294 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.59□□□□□ -2.5
HMGA1P17096 MTND5P13-201ENST00000513046 1079 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AC011451.2-201ENST00000604303 598 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 RN7SL660P-201ENST00000614852 299 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AL163051.2-201ENST00000618976 735 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AL596245.1-201ENST00000618994 362 ntBASIC-0.59□□□□□ -2.5
HMGA1P17096 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.6□□□□□ -2.51
HMGA1P17096 MIR1265-201ENST00000408444 86 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 Z95118.1-201ENST00000421372 247 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 MTCO2P1-201ENST00000424648 477 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms