Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-266P-201ENST00000364225 107 ntBASIC1.23□□□□□ -2.21
CD28P10747 SNORD48-201ENST00000364953 64 ntBASIC1.23□□□□□ -2.21
CD28P10747 RNU6-1103P-201ENST00000384150 107 ntBASIC1.23□□□□□ -2.21
CD28P10747 RNU6-348P-201ENST00000384386 107 ntBASIC1.23□□□□□ -2.21
CD28P10747 SNORA67.6-201ENST00000391093 99 ntBASIC1.23□□□□□ -2.21
CD28P10747 RNU6-903P-201ENST00000391270 109 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.23□□□□□ -2.21
CD28P10747 AC010975.2-201ENST00000427781 588 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC244670.1-201ENST00000436879 112 ntBASIC1.23□□□□□ -2.21
CD28P10747 RNU1-131P-201ENST00000458943 161 ntBASIC1.23□□□□□ -2.21
CD28P10747 SCARNA18-201ENST00000459004 134 ntBASIC1.23□□□□□ -2.21
CD28P10747 RNU7-167P-201ENST00000459160 62 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC007547.1-201ENST00000462177 490 ntBASIC1.23□□□□□ -2.21
CD28P10747 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.23□□□□□ -2.21
CD28P10747 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.23□□□□□ -2.21
CD28P10747 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.23□□□□□ -2.21
CD28P10747 AP001893.2-201ENST00000526949 202 ntBASIC1.23□□□□□ -2.21
CD28P10747 AL137161.1-201ENST00000532231 390 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.23□□□□□ -2.21
CD28P10747 SUB1P2-201ENST00000556401 297 ntBASIC1.23□□□□□ -2.21
CD28P10747 NIFKP6-201ENST00000598115 845 ntBASIC1.23□□□□□ -2.21
CD28P10747 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
CD28P10747 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC087752.4-201ENST00000605911 462 ntBASIC1.23□□□□□ -2.21
CD28P10747 BX248123.2-201ENST00000606318 124 ntBASIC1.23□□□□□ -2.21
CD28P10747 AC002044.1-201ENST00000606707 158 ntBASIC1.23□□□□□ -2.21
CD28P10747 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
CD28P10747 AL450472.1-202ENST00000637286 180 ntBASIC1.23□□□□□ -2.21
CD28P10747 AL390237.1-201ENST00000404226 1415 ntBASIC1.23□□□□□ -2.21
CD28P10747 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNU6-552P-201ENST00000362869 119 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNU4-42P-201ENST00000364738 142 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNU6-160P-201ENST00000384591 107 ntBASIC1.22□□□□□ -2.21
CD28P10747 AL357139.1-201ENST00000407792 426 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNA5SP100-201ENST00000410903 110 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNA5SP59-201ENST00000410922 110 ntBASIC1.22□□□□□ -2.21
CD28P10747 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.22□□□□□ -2.21
CD28P10747 MTATP6P18-201ENST00000417994 673 ntBASIC1.22□□□□□ -2.21
CD28P10747 MTND1P27-201ENST00000451117 902 ntBASIC1.22□□□□□ -2.21
CD28P10747 AC145146.1-201ENST00000496370 254 ntBASIC1.22□□□□□ -2.21
CD28P10747 ARL2BPP4-201ENST00000506854 471 ntBASIC1.22□□□□□ -2.21
CD28P10747 SNORA31.16-201ENST00000516773 139 ntBASIC1.22□□□□□ -2.21
CD28P10747 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
CD28P10747 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.22□□□□□ -2.21
CD28P10747 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.22□□□□□ -2.21
CD28P10747 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.22□□□□□ -2.21
CD28P10747 HSBP1P1-201ENST00000555205 166 ntBASIC1.22□□□□□ -2.21
CD28P10747 AL391840.1-201ENST00000571144 367 ntBASIC1.22□□□□□ -2.21
CD28P10747 RSL24D1P11-201ENST00000591045 491 ntBASIC1.22□□□□□ -2.21
CD28P10747 AL022345.1-201ENST00000607292 135 ntBASIC1.22□□□□□ -2.21
CD28P10747 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.22□□□□□ -2.21
CD28P10747 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.22□□□□□ -2.21
CD28P10747 AC022513.1-201ENST00000624512 117 ntBASIC1.22□□□□□ -2.21
CD28P10747 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.22□□□□□ -2.21
CD28P10747 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CD28P10747 AC092268.1-201ENST00000342691 405 ntBASIC1.21□□□□□ -2.22
CD28P10747 MIR340-201ENST00000362125 95 ntBASIC1.21□□□□□ -2.22
CD28P10747 RNA5SP493-201ENST00000364115 91 ntBASIC1.21□□□□□ -2.22
CD28P10747 SNORA75-201ENST00000384158 137 ntBASIC1.21□□□□□ -2.22
CD28P10747 RNU6-517P-201ENST00000384362 110 ntBASIC1.21□□□□□ -2.22
CD28P10747 SNORA12-201ENST00000391162 147 ntBASIC1.21□□□□□ -2.22
CD28P10747 MIR1323-201ENST00000408090 73 ntBASIC1.21□□□□□ -2.22
CD28P10747 RNU6-174P-201ENST00000410406 106 ntBASIC1.21□□□□□ -2.22
CD28P10747 RN7SKP142-201ENST00000411236 328 ntBASIC1.21□□□□□ -2.22
CD28P10747 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
CD28P10747 RNU7-180P-201ENST00000459240 63 ntBASIC1.21□□□□□ -2.22
CD28P10747 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.21□□□□□ -2.22
CD28P10747 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.21□□□□□ -2.22
CD28P10747 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.21□□□□□ -2.22
CD28P10747 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CD28P10747 AC090115.3-201ENST00000553218 849 ntBASIC1.21□□□□□ -2.22
CD28P10747 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.21□□□□□ -2.22
CD28P10747 MIR4528-201ENST00000577763 90 ntBASIC1.21□□□□□ -2.22
CD28P10747 AC121247.2-201ENST00000604776 136 ntBASIC1.21□□□□□ -2.22
CD28P10747 AC005520.5-201ENST00000613926 164 ntBASIC1.21□□□□□ -2.22
CD28P10747 LINC02555-201ENST00000563933 1951 ntBASIC1.21□□□□□ -2.22
CD28P10747 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
CD28P10747 RNU6-743P-201ENST00000364151 106 ntBASIC1.2□□□□□ -2.22
CD28P10747 SNORD114-6-201ENST00000364393 72 ntBASIC1.2□□□□□ -2.22
CD28P10747 RNU6-26P-201ENST00000383985 107 ntBASIC1.2□□□□□ -2.22
CD28P10747 RNU6-997P-201ENST00000384725 107 ntBASIC1.2□□□□□ -2.22
CD28P10747 MIR517C-201ENST00000385103 95 ntBASIC1.2□□□□□ -2.22
CD28P10747 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CD28P10747 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.2□□□□□ -2.22
CD28P10747 AL590135.1-201ENST00000422215 156 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC019205.3-201ENST00000424573 156 ntBASIC1.2□□□□□ -2.22
CD28P10747 AL358934.1-201ENST00000432346 324 ntBASIC1.2□□□□□ -2.22
CD28P10747 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
CD28P10747 AC092473.1-201ENST00000441098 221 ntBASIC1.2□□□□□ -2.22
CD28P10747 USP9YP29-201ENST00000445112 563 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC016700.2-201ENST00000446011 156 ntBASIC1.2□□□□□ -2.22
CD28P10747 HMGN2P18-201ENST00000450680 270 ntBASIC1.2□□□□□ -2.22
CD28P10747 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.2□□□□□ -2.22
CD28P10747 SNRPFP3-201ENST00000457792 225 ntBASIC1.2□□□□□ -2.22
CD28P10747 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.2□□□□□ -2.22
CD28P10747 AC015911.1-201ENST00000495111 156 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC008834.1-201ENST00000511612 175 ntBASIC1.2□□□□□ -2.22
CD28P10747 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.2□□□□□ -2.22
CD28P10747 RNA5SP490-201ENST00000517141 136 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC069113.1-201ENST00000517763 267 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms