Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 snoU13.26-201ENST00000459452 105 ntBASIC2.61□□□□□ -1.99
LDLRP01130 GZMAP1-201ENST00000503054 631 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC113155.1-201ENST00000511141 769 ntBASIC2.61□□□□□ -1.99
LDLRP01130 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.61□□□□□ -1.99
LDLRP01130 ACA59.2-201ENST00000517061 156 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC069113.1-201ENST00000517763 267 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AP004607.1-201ENST00000524456 203 ntBASIC2.61□□□□□ -1.99
LDLRP01130 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC024153.1-201ENST00000603103 365 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC091152.3-201ENST00000604227 325 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC018462.2-201ENST00000605375 395 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC009229.3-201ENST00000608056 282 ntBASIC2.61□□□□□ -1.99
LDLRP01130 Z69720.2-201ENST00000624755 279 ntBASIC2.61□□□□□ -1.99
LDLRP01130 AC135776.4-201ENST00000624300 1904 ntBASIC2.61□□□□□ -1.99
LDLRP01130 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LDLRP01130 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
LDLRP01130 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LDLRP01130 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.6□□□□□ -1.99
LDLRP01130 RNU6-593P-201ENST00000364716 112 ntBASIC2.6□□□□□ -1.99
LDLRP01130 RNU5E-7P-201ENST00000365290 117 ntBASIC2.6□□□□□ -1.99
LDLRP01130 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
LDLRP01130 Y_RNA.527-201ENST00000384573 102 ntBASIC2.6□□□□□ -1.99
LDLRP01130 Y_RNA.557-201ENST00000384680 107 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AL133475.1-201ENST00000404414 305 ntBASIC2.6□□□□□ -1.99
LDLRP01130 Y_RNA.594-201ENST00000410373 140 ntBASIC2.6□□□□□ -1.99
LDLRP01130 RNU6-1050P-201ENST00000410388 107 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AC096649.2-201ENST00000416186 393 ntBASIC2.6□□□□□ -1.99
LDLRP01130 PTGES3P4-201ENST00000426243 356 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.6□□□□□ -1.99
LDLRP01130 MRPL42P6-201ENST00000486397 371 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
LDLRP01130 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.6□□□□□ -1.99
LDLRP01130 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
LDLRP01130 RNU6-1332P-201ENST00000516666 104 ntBASIC2.6□□□□□ -1.99
LDLRP01130 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LDLRP01130 AC025423.5-201ENST00000550230 219 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.6□□□□□ -1.99
LDLRP01130 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AC008269.2-201ENST00000561915 1105 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AC090616.3-201ENST00000582184 217 ntBASIC2.6□□□□□ -1.99
LDLRP01130 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
LDLRP01130 OR1M4P-201ENST00000589199 287 ntBASIC2.6□□□□□ -1.99
LDLRP01130 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.6□□□□□ -1.99
LDLRP01130 7SK.7-201ENST00000603504 247 ntBASIC2.6□□□□□ -1.99
LDLRP01130 SCARNA4-202ENST00000625402 129 ntBASIC2.6□□□□□ -1.99
LDLRP01130 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
LDLRP01130 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
LDLRP01130 RNU6-942P-201ENST00000363002 107 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC117470.1-201ENST00000381974 330 ntBASIC2.59□□□□□ -1.99
LDLRP01130 SNORD73A-201ENST00000386062 65 ntBASIC2.59□□□□□ -1.99
LDLRP01130 MT-TR-201ENST00000387439 65 ntBASIC2.59□□□□□ -1.99
LDLRP01130 MIR147B-201ENST00000390185 80 ntBASIC2.59□□□□□ -1.99
LDLRP01130 Y_RNA.645-201ENST00000391229 102 ntBASIC2.59□□□□□ -1.99
LDLRP01130 SNORA75.6-201ENST00000391318 127 ntBASIC2.59□□□□□ -1.99
LDLRP01130 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC243428.1-201ENST00000421099 264 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC003685.2-201ENST00000422795 395 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AL358075.3-201ENST00000426289 226 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AL031274.1-201ENST00000450334 232 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RPL23AP45-201ENST00000476406 468 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RNU6-470P-201ENST00000515954 104 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RNU6-764P-201ENST00000516396 105 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RNA5SP384-201ENST00000516615 116 ntBASIC2.59□□□□□ -1.99
LDLRP01130 SNORA43.2-201ENST00000516652 128 ntBASIC2.59□□□□□ -1.99
LDLRP01130 SNORD19.2-201ENST00000516978 73 ntBASIC2.59□□□□□ -1.99
LDLRP01130 RNU6-699P-201ENST00000517081 110 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.59□□□□□ -1.99
LDLRP01130 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.59□□□□□ -1.99
LDLRP01130 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.59□□□□□ -1.99
LDLRP01130 AC110588.1-201ENST00000559699 137 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC004817.2-201ENST00000561794 651 ntBASIC2.59□□□□□ -1.99
LDLRP01130 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.59□□□□□ -1.99
LDLRP01130 AC104695.3-201ENST00000604052 296 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC090425.1-201ENST00000610007 140 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AL162373.1-201ENST00000620433 407 ntBASIC2.59□□□□□ -1.99
LDLRP01130 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.59□□□□□ -1.99
LDLRP01130 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
LDLRP01130 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LDLRP01130 Y_RNA.47-201ENST00000362697 108 ntBASIC2.58□□□□□ -2
LDLRP01130 RNU6-78P-201ENST00000362897 107 ntBASIC2.58□□□□□ -2
LDLRP01130 Y_RNA.153-201ENST00000363615 91 ntBASIC2.58□□□□□ -2
LDLRP01130 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
LDLRP01130 Y_RNA.401-201ENST00000383965 117 ntBASIC2.58□□□□□ -2
LDLRP01130 RNU6-128P-201ENST00000383976 107 ntBASIC2.58□□□□□ -2
LDLRP01130 SNORD116-20-201ENST00000384529 92 ntBASIC2.58□□□□□ -2
LDLRP01130 SNORD56-201ENST00000413522 71 ntBASIC2.58□□□□□ -2
LDLRP01130 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
LDLRP01130 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
LDLRP01130 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
LDLRP01130 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
LDLRP01130 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.58□□□□□ -2
LDLRP01130 AL731563.1-201ENST00000442202 214 ntBASIC2.58□□□□□ -2
LDLRP01130 AC012308.1-201ENST00000451232 178 ntBASIC2.58□□□□□ -2
LDLRP01130 SNORD5.1-201ENST00000458800 75 ntBASIC2.58□□□□□ -2
LDLRP01130 RNU7-138P-201ENST00000459479 64 ntBASIC2.58□□□□□ -2
LDLRP01130 AC092436.3-201ENST00000511788 257 ntBASIC2.58□□□□□ -2
LDLRP01130 SNORA25.10-201ENST00000515926 124 ntBASIC2.58□□□□□ -2
LDLRP01130 SCARNA17.1-201ENST00000516211 143 ntBASIC2.58□□□□□ -2
LDLRP01130 SCARNA17.2-201ENST00000516334 143 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms