Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 U2.5-201ENST00000619465 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 U2.10-201ENST00000620268 191 ntBASIC2.59□□□□□ -1.99
DDX58O95786 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
DDX58O95786 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX58O95786 RNU6-254P-201ENST00000363377 107 ntBASIC2.58□□□□□ -2
DDX58O95786 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX58O95786 RNU6-43P-201ENST00000384302 107 ntBASIC2.58□□□□□ -2
DDX58O95786 AL139156.1-201ENST00000412785 841 ntBASIC2.58□□□□□ -2
DDX58O95786 AC244670.1-201ENST00000436879 112 ntBASIC2.58□□□□□ -2
DDX58O95786 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.58□□□□□ -2
DDX58O95786 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.58□□□□□ -2
DDX58O95786 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
DDX58O95786 RPL9P9-202ENST00000466501 579 ntBASIC2.58□□□□□ -2
DDX58O95786 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.58□□□□□ -2
DDX58O95786 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.58□□□□□ -2
DDX58O95786 AC026371.1-201ENST00000551867 419 ntBASIC2.58□□□□□ -2
DDX58O95786 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.58□□□□□ -2
DDX58O95786 AC026271.5-201ENST00000577873 130 ntBASIC2.58□□□□□ -2
DDX58O95786 AC104458.1-201ENST00000608243 463 ntBASIC2.58□□□□□ -2
DDX58O95786 AC092794.1-201ENST00000612734 582 ntBASIC2.58□□□□□ -2
DDX58O95786 AC093913.1-201ENST00000614178 329 ntBASIC2.58□□□□□ -2
DDX58O95786 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.57□□□□□ -2
DDX58O95786 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
DDX58O95786 SNORA32.2-201ENST00000384049 122 ntBASIC2.57□□□□□ -2
DDX58O95786 Y_RNA.530-201ENST00000384587 101 ntBASIC2.57□□□□□ -2
DDX58O95786 MIR764-201ENST00000390811 85 ntBASIC2.57□□□□□ -2
DDX58O95786 Y_RNA.597-201ENST00000410463 100 ntBASIC2.57□□□□□ -2
DDX58O95786 AL590135.1-201ENST00000422215 156 ntBASIC2.57□□□□□ -2
DDX58O95786 AC019205.3-201ENST00000424573 156 ntBASIC2.57□□□□□ -2
DDX58O95786 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.57□□□□□ -2
DDX58O95786 AC016700.2-201ENST00000446011 156 ntBASIC2.57□□□□□ -2
DDX58O95786 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
DDX58O95786 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.57□□□□□ -2
DDX58O95786 AC015911.1-201ENST00000495111 156 ntBASIC2.57□□□□□ -2
DDX58O95786 MTCYBP18-201ENST00000501056 747 ntBASIC2.57□□□□□ -2
DDX58O95786 AC022447.4-201ENST00000504053 364 ntBASIC2.57□□□□□ -2
DDX58O95786 MIR4524B-201ENST00000581569 115 ntBASIC2.57□□□□□ -2
DDX58O95786 MIR3136-201ENST00000583498 78 ntBASIC2.57□□□□□ -2
DDX58O95786 AL356157.2-201ENST00000605122 111 ntBASIC2.57□□□□□ -2
DDX58O95786 AC002553.4-201ENST00000616896 331 ntBASIC2.57□□□□□ -2
DDX58O95786 AC090617.10-201ENST00000624308 134 ntBASIC2.57□□□□□ -2
DDX58O95786 SNORD98-201ENST00000636377 67 ntBASIC2.57□□□□□ -2
DDX58O95786 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
DDX58O95786 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.57□□□□□ -2
DDX58O95786 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
DDX58O95786 Y_RNA.100-201ENST00000363141 102 ntBASIC2.56□□□□□ -2
DDX58O95786 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
DDX58O95786 RNA5SP118-201ENST00000410385 109 ntBASIC2.56□□□□□ -2
DDX58O95786 EDDM3CP-201ENST00000415977 425 ntBASIC2.56□□□□□ -2
DDX58O95786 CR769767.1-201ENST00000436337 346 ntBASIC2.56□□□□□ -2
DDX58O95786 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.56□□□□□ -2
DDX58O95786 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
DDX58O95786 NFU1P2-201ENST00000448700 469 ntBASIC2.56□□□□□ -2
DDX58O95786 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.56□□□□□ -2
DDX58O95786 AMD1P1-201ENST00000457220 922 ntBASIC2.56□□□□□ -2
DDX58O95786 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.56□□□□□ -2
DDX58O95786 HMGB1P35-201ENST00000503360 598 ntBASIC2.56□□□□□ -2
DDX58O95786 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
DDX58O95786 RNU6-237P-201ENST00000515985 71 ntBASIC2.56□□□□□ -2
DDX58O95786 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
DDX58O95786 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
DDX58O95786 AC034114.1-201ENST00000520293 285 ntBASIC2.56□□□□□ -2
DDX58O95786 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.56□□□□□ -2
DDX58O95786 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.56□□□□□ -2
DDX58O95786 RPS3AP23-202ENST00000574601 686 ntBASIC2.56□□□□□ -2
DDX58O95786 AL034555.1-201ENST00000604816 211 ntBASIC2.56□□□□□ -2
DDX58O95786 AC104237.2-201ENST00000612456 443 ntBASIC2.56□□□□□ -2
DDX58O95786 FAM157A-202ENST00000615155 405 ntBASIC2.56□□□□□ -2
DDX58O95786 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.56□□□□□ -2
DDX58O95786 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
DDX58O95786 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
DDX58O95786 AC019129.1-201ENST00000403786 261 ntBASIC2.55□□□□□ -2
DDX58O95786 VN1R36P-201ENST00000414936 291 ntBASIC2.55□□□□□ -2
DDX58O95786 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.55□□□□□ -2
DDX58O95786 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.55□□□□□ -2
DDX58O95786 UBE2V1P4-201ENST00000425374 344 ntBASIC2.55□□□□□ -2
DDX58O95786 AC078809.1-201ENST00000427601 140 ntBASIC2.55□□□□□ -2
DDX58O95786 AC027124.2-201ENST00000428249 105 ntBASIC2.55□□□□□ -2
DDX58O95786 SNAP23P1-201ENST00000433229 246 ntBASIC2.55□□□□□ -2
DDX58O95786 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.55□□□□□ -2
DDX58O95786 MTND4P23-201ENST00000447723 1363 ntBASIC2.55□□□□□ -2
DDX58O95786 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.55□□□□□ -2
DDX58O95786 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.55□□□□□ -2
DDX58O95786 U8.21-201ENST00000459536 136 ntBASIC2.55□□□□□ -2
DDX58O95786 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.55□□□□□ -2
DDX58O95786 AC016632.1-201ENST00000503994 196 ntBASIC2.55□□□□□ -2
DDX58O95786 FAM206BP-201ENST00000510179 541 ntBASIC2.55□□□□□ -2
DDX58O95786 RNU6-612P-201ENST00000516909 102 ntBASIC2.55□□□□□ -2
DDX58O95786 RNU6-273P-201ENST00000516937 96 ntBASIC2.55□□□□□ -2
DDX58O95786 TRAV32-201ENST00000553993 340 ntBASIC2.55□□□□□ -2
DDX58O95786 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
DDX58O95786 AL031274.2-201ENST00000599419 203 ntBASIC2.55□□□□□ -2
DDX58O95786 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.55□□□□□ -2
DDX58O95786 AP001836.1-201ENST00000604675 523 ntBASIC2.55□□□□□ -2
DDX58O95786 AC009318.2-201ENST00000610917 651 ntBASIC2.55□□□□□ -2
DDX58O95786 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.55□□□□□ -2
DDX58O95786 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
DDX58O95786 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
DDX58O95786 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DDX58O95786 ZNF720P1-201ENST00000562403 1939 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms