Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC048334.1-201ENST00000477975 159 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 PDCD5P2-201ENST00000507570 312 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.23□□□□□ -2.37
ABCA1O95477 RNU4-77P-201ENST00000516692 156 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 RNA5SP481-201ENST00000516814 122 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 AC092574.1-201ENST00000609771 420 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 AC130324.3-201ENST00000614165 542 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.23□□□□□ -2.37
ABCA1O95477 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
ABCA1O95477 AC106858.1-201ENST00000637497 429 ntBASIC0.23□□□□□ -2.37
ABCA1O95477 Y_RNA.170-201ENST00000363746 110 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RNU6-110P-201ENST00000384508 104 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 MIR32-201ENST00000384965 70 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RNU6-1025P-201ENST00000410629 104 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC244023.1-201ENST00000426884 112 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 MTCO3P29-201ENST00000432119 779 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC130509.1-201ENST00000464158 433 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC105758.1-201ENST00000506038 399 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA1O95477 RNU6-583P-201ENST00000516012 92 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 SNORA31.2-201ENST00000516019 134 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RNY4P37-201ENST00000516225 96 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 SNORA70.22-201ENST00000517160 124 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA1O95477 AC092325.1-201ENST00000566449 554 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC242498.1-201ENST00000604134 111 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC243994.1-201ENST00000618627 109 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.22□□□□□ -2.37
ABCA1O95477 AC097372.5-201ENST00000623665 376 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC099654.8-201ENST00000637757 681 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 SNORD3E-201ENST00000362899 217 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RNU5A-8P-201ENST00000364102 114 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AL133475.1-201ENST00000404414 305 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RNU6-575P-201ENST00000411326 105 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC063976.4-201ENST00000421971 163 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 MTND4P20-201ENST00000424125 869 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RSL24D1P8-201ENST00000434442 492 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 MTND2P30-201ENST00000456663 382 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC006026.2-201ENST00000457376 180 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RAP1BP2-201ENST00000478270 544 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 RPL21P136-201ENST00000605378 396 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AC012557.2-201ENST00000605919 418 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ABCA1O95477 SNORD3E-202ENST00000627253 216 ntBASIC0.22□□□□□ -2.37
ABCA1O95477 AL391994.1-201ENST00000254724 282 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 RNA5SP259-201ENST00000365541 109 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 SNORA4.3-201ENST00000365564 137 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 MIR942-201ENST00000401111 86 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC060773.1-201ENST00000421698 310 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 GAPDHP17-201ENST00000449858 1001 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 SNORD124-201ENST00000459577 104 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AP001893.2-201ENST00000526949 202 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC068620.3-201ENST00000602749 560 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 RMST_4.1-201ENST00000616886 107 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 Y_RNA.33-201ENST00000362591 102 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 Y_RNA.311-201ENST00000365068 96 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 RNU4-12P-201ENST00000365233 139 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 RNU5E-7P-201ENST00000365290 117 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 RNU6-817P-201ENST00000391083 104 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AL079342.2-201ENST00000403367 482 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.21□□□□□ -2.38
ABCA1O95477 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 MTCO3P9-201ENST00000506989 781 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
ABCA1O95477 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA1O95477 AC104465.1-201ENST00000611365 139 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.21□□□□□ -2.38
ABCA1O95477 AC092656.1-203ENST00000624134 423 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC103706.2-201ENST00000638080 240 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 AC006927.4-201ENST00000639187 543 ntBASIC0.21□□□□□ -2.38
ABCA1O95477 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
ABCA1O95477 snoU2-30.2-201ENST00000362805 70 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 RNA5SP368-201ENST00000364298 116 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 MIR10B-201ENST00000385011 110 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA1O95477 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.2□□□□□ -2.38
ABCA1O95477 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA1O95477 MTCO3P43-201ENST00000440974 771 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA1O95477 RPS27AP8-201ENST00000452665 445 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC093899.1-201ENST00000457984 376 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 RPL39P38-201ENST00000467018 153 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 ACA64.5-201ENST00000516207 127 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 RNA5SP168-201ENST00000516642 112 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 SUMO2P16-201ENST00000519475 264 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 TMF1P1-201ENST00000576058 373 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC091135.1-201ENST00000585943 307 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 MIR15A-201ENST00000607334 83 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC008147.4-201ENST00000617570 1204 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC097460.3-201ENST00000623099 442 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AC068700.1-201ENST00000565862 3754 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms