Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU4-28P-201ENST00000364739 141 ntBASIC1.35□□□□□ -2.19
SNX4O95219 SNORD32A-201ENST00000364805 84 ntBASIC1.35□□□□□ -2.19
SNX4O95219 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
SNX4O95219 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.35□□□□□ -2.19
SNX4O95219 MTCO3P29-201ENST00000432119 779 ntBASIC1.35□□□□□ -2.19
SNX4O95219 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.35□□□□□ -2.19
SNX4O95219 AC245047.4-201ENST00000433189 144 ntBASIC1.35□□□□□ -2.19
SNX4O95219 AC099677.2-201ENST00000436385 175 ntBASIC1.35□□□□□ -2.19
SNX4O95219 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.35□□□□□ -2.19
SNX4O95219 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.35□□□□□ -2.19
SNX4O95219 RAP1BP2-201ENST00000478270 544 ntBASIC1.35□□□□□ -2.19
SNX4O95219 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.35□□□□□ -2.19
SNX4O95219 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.35□□□□□ -2.19
SNX4O95219 FABP5P5-201ENST00000515537 406 ntBASIC1.35□□□□□ -2.19
SNX4O95219 RNU6-1098P-201ENST00000516772 96 ntBASIC1.35□□□□□ -2.19
SNX4O95219 SCARNA1-201ENST00000517138 166 ntBASIC1.35□□□□□ -2.19
SNX4O95219 RNA5SP437-201ENST00000517249 129 ntBASIC1.35□□□□□ -2.19
SNX4O95219 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.35□□□□□ -2.19
SNX4O95219 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
SNX4O95219 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.35□□□□□ -2.19
SNX4O95219 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.35□□□□□ -2.19
SNX4O95219 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
SNX4O95219 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
SNX4O95219 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SNX4O95219 RNU6-428P-201ENST00000362942 107 ntBASIC1.34□□□□□ -2.19
SNX4O95219 MRPL35P1-201ENST00000404272 572 ntBASIC1.34□□□□□ -2.19
SNX4O95219 MIR1323-201ENST00000408090 73 ntBASIC1.34□□□□□ -2.19
SNX4O95219 RNU4-46P-201ENST00000410818 138 ntBASIC1.34□□□□□ -2.19
SNX4O95219 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
SNX4O95219 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
SNX4O95219 AL603825.1-201ENST00000438481 80 ntBASIC1.34□□□□□ -2.19
SNX4O95219 GTF2IP13-201ENST00000438487 386 ntBASIC1.34□□□□□ -2.19
SNX4O95219 OR2AQ1P-201ENST00000451972 200 ntBASIC1.34□□□□□ -2.19
SNX4O95219 RNU7-182P-201ENST00000459009 62 ntBASIC1.34□□□□□ -2.19
SNX4O95219 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.34□□□□□ -2.19
SNX4O95219 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX4O95219 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX4O95219 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX4O95219 MTCO3P28-201ENST00000513351 515 ntBASIC1.34□□□□□ -2.19
SNX4O95219 AP003072.2-201ENST00000527756 676 ntBASIC1.34□□□□□ -2.19
SNX4O95219 ZNF321P-202ENST00000550843 495 ntBASIC1.34□□□□□ -2.19
SNX4O95219 CYP4A27P-201ENST00000567218 190 ntBASIC1.34□□□□□ -2.19
SNX4O95219 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX4O95219 BNIP3P8-201ENST00000597863 560 ntBASIC1.34□□□□□ -2.19
SNX4O95219 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.34□□□□□ -2.19
SNX4O95219 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
SNX4O95219 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
SNX4O95219 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
SNX4O95219 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
SNX4O95219 RNU6-862P-201ENST00000362804 105 ntBASIC1.33□□□□□ -2.2
SNX4O95219 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
SNX4O95219 Y_RNA.132-201ENST00000363421 102 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RNU6-1214P-201ENST00000363650 109 ntBASIC1.33□□□□□ -2.2
SNX4O95219 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
SNX4O95219 Y_RNA.367-201ENST00000365544 101 ntBASIC1.33□□□□□ -2.2
SNX4O95219 MIR454-201ENST00000390180 115 ntBASIC1.33□□□□□ -2.2
SNX4O95219 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RPL37P10-201ENST00000412884 288 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RPL23AP95-201ENST00000426806 265 ntBASIC1.33□□□□□ -2.2
SNX4O95219 MTND5P25-201ENST00000430499 799 ntBASIC1.33□□□□□ -2.2
SNX4O95219 HSFY7P-201ENST00000432672 318 ntBASIC1.33□□□□□ -2.2
SNX4O95219 GPR143P-201ENST00000434155 205 ntBASIC1.33□□□□□ -2.2
SNX4O95219 AL596276.1-201ENST00000434465 418 ntBASIC1.33□□□□□ -2.2
SNX4O95219 HSFY8P-201ENST00000437934 318 ntBASIC1.33□□□□□ -2.2
SNX4O95219 EPS15P1-201ENST00000448836 336 ntBASIC1.33□□□□□ -2.2
SNX4O95219 HSFY5P-201ENST00000453726 309 ntBASIC1.33□□□□□ -2.2
SNX4O95219 MTND2P39-201ENST00000457230 764 ntBASIC1.33□□□□□ -2.2
SNX4O95219 snoU13.30-201ENST00000458951 104 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RN7SKP210-201ENST00000459176 261 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
SNX4O95219 RPS23P5-201ENST00000495419 428 ntBASIC1.33□□□□□ -2.2
SNX4O95219 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.33□□□□□ -2.2
SNX4O95219 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
SNX4O95219 AC019176.1-201ENST00000518519 225 ntBASIC1.33□□□□□ -2.2
SNX4O95219 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.33□□□□□ -2.2
SNX4O95219 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.33□□□□□ -2.2
SNX4O95219 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
SNX4O95219 AC015688.6-201ENST00000577737 104 ntBASIC1.33□□□□□ -2.2
SNX4O95219 AL136221.1-201ENST00000621449 509 ntBASIC1.33□□□□□ -2.2
SNX4O95219 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
SNX4O95219 SEPT14P19-203ENST00000633205 211 ntBASIC1.33□□□□□ -2.2
SNX4O95219 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.33□□□□□ -2.2
SNX4O95219 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNX4O95219 RNU6-552P-201ENST00000362869 119 ntBASIC1.32□□□□□ -2.2
SNX4O95219 RNU1-76P-201ENST00000362903 159 ntBASIC1.32□□□□□ -2.2
SNX4O95219 RNU1-96P-201ENST00000364163 162 ntBASIC1.32□□□□□ -2.2
SNX4O95219 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
SNX4O95219 BTF3P4-201ENST00000418852 495 ntBASIC1.32□□□□□ -2.2
SNX4O95219 SNAP23P1-201ENST00000433229 246 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.32□□□□□ -2.2
SNX4O95219 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC009474.2-201ENST00000451383 136 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC007547.1-201ENST00000462177 490 ntBASIC1.32□□□□□ -2.2
SNX4O95219 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.32□□□□□ -2.2
SNX4O95219 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.32□□□□□ -2.2
SNX4O95219 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms