Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR7843-201ENST00000622274 79 ntBASIC2.54□□□□□ -2
RTN3O95197 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.54□□□□□ -2
RTN3O95197 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
RTN3O95197 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.54□□□□□ -2
RTN3O95197 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTN3O95197 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTN3O95197 Y_RNA.135-201ENST00000363439 95 ntBASIC2.53□□□□□ -2
RTN3O95197 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
RTN3O95197 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTN3O95197 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
RTN3O95197 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.53□□□□□ -2
RTN3O95197 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.53□□□□□ -2
RTN3O95197 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.53□□□□□ -2
RTN3O95197 MTATP6P13-201ENST00000438531 667 ntBASIC2.53□□□□□ -2
RTN3O95197 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTN3O95197 AC145146.1-201ENST00000496370 254 ntBASIC2.53□□□□□ -2
RTN3O95197 AP003033.1-201ENST00000527244 415 ntBASIC2.53□□□□□ -2
RTN3O95197 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
RTN3O95197 AC022616.8-201ENST00000533569 253 ntBASIC2.53□□□□□ -2
RTN3O95197 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.53□□□□□ -2
RTN3O95197 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
RTN3O95197 CPDP1-201ENST00000579660 283 ntBASIC2.53□□□□□ -2
RTN3O95197 MIR3672-201ENST00000584290 82 ntBASIC2.53□□□□□ -2
RTN3O95197 AC023043.2-201ENST00000589678 1026 ntBASIC2.53□□□□□ -2
RTN3O95197 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.53□□□□□ -2
RTN3O95197 AC146944.4-201ENST00000602697 718 ntBASIC2.53□□□□□ -2
RTN3O95197 AC078795.3-201ENST00000602913 472 ntBASIC2.53□□□□□ -2
RTN3O95197 AC093913.1-201ENST00000614178 329 ntBASIC2.53□□□□□ -2
RTN3O95197 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
RTN3O95197 AC063943.3-201ENST00000615562 356 ntBASIC2.53□□□□□ -2
RTN3O95197 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
RTN3O95197 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.53□□□□□ -2
RTN3O95197 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTN3O95197 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTN3O95197 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
RTN3O95197 RNU6-562P-201ENST00000362731 107 ntBASIC2.52□□□□□ -2.01
RTN3O95197 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RTN3O95197 WARS2P1-201ENST00000429678 537 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.52□□□□□ -2.01
RTN3O95197 NFU1P2-201ENST00000448700 469 ntBASIC2.52□□□□□ -2.01
RTN3O95197 UBL5P3-201ENST00000475112 231 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AC026436.1-201ENST00000510537 270 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
RTN3O95197 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN3O95197 SNORA4.4-201ENST00000515921 135 ntBASIC2.52□□□□□ -2.01
RTN3O95197 RNU1-41P-201ENST00000516161 162 ntBASIC2.52□□□□□ -2.01
RTN3O95197 RNU6-864P-201ENST00000516256 108 ntBASIC2.52□□□□□ -2.01
RTN3O95197 RNU1-48P-201ENST00000516400 162 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AF235103.2-201ENST00000525753 346 ntBASIC2.52□□□□□ -2.01
RTN3O95197 NDUFA5P6-201ENST00000542110 379 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
RTN3O95197 MIR3923-201ENST00000579521 83 ntBASIC2.52□□□□□ -2.01
RTN3O95197 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
RTN3O95197 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
RTN3O95197 SNORA43.4-201ENST00000629559 138 ntBASIC2.52□□□□□ -2.01
RTN3O95197 AL450472.1-202ENST00000637286 180 ntBASIC2.52□□□□□ -2.01
RTN3O95197 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.51□□□□□ -2.01
RTN3O95197 SNORA3A-201ENST00000364113 130 ntBASIC2.51□□□□□ -2.01
RTN3O95197 Y_RNA.212-201ENST00000364177 102 ntBASIC2.51□□□□□ -2.01
RTN3O95197 RNU6-1013P-201ENST00000384180 107 ntBASIC2.51□□□□□ -2.01
RTN3O95197 SNORA70B-201ENST00000384210 135 ntBASIC2.51□□□□□ -2.01
RTN3O95197 MTCYBP2-201ENST00000407745 171 ntBASIC2.51□□□□□ -2.01
RTN3O95197 RNU4-53P-201ENST00000410828 140 ntBASIC2.51□□□□□ -2.01
RTN3O95197 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.51□□□□□ -2.01
RTN3O95197 IFNA20P-201ENST00000436840 528 ntBASIC2.51□□□□□ -2.01
RTN3O95197 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
RTN3O95197 RNU7-187P-201ENST00000458985 68 ntBASIC2.51□□□□□ -2.01
RTN3O95197 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.51□□□□□ -2.01
RTN3O95197 RNU6-667P-201ENST00000517186 102 ntBASIC2.51□□□□□ -2.01
RTN3O95197 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
RTN3O95197 AC018638.8-201ENST00000588755 281 ntBASIC2.51□□□□□ -2.01
RTN3O95197 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
RTN3O95197 AL133215.3-201ENST00000609801 448 ntBASIC2.51□□□□□ -2.01
RTN3O95197 MIR8076-201ENST00000611401 83 ntBASIC2.51□□□□□ -2.01
RTN3O95197 AL136221.1-201ENST00000621449 509 ntBASIC2.51□□□□□ -2.01
RTN3O95197 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTN3O95197 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.5□□□□□ -2.01
RTN3O95197 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
RTN3O95197 SNORA32.2-201ENST00000384049 122 ntBASIC2.5□□□□□ -2.01
RTN3O95197 SNORA51.11-201ENST00000384442 131 ntBASIC2.5□□□□□ -2.01
RTN3O95197 RNU6-95P-201ENST00000384697 107 ntBASIC2.5□□□□□ -2.01
RTN3O95197 MIR521-1-201ENST00000384902 87 ntBASIC2.5□□□□□ -2.01
RTN3O95197 SNORA46.1-201ENST00000391069 153 ntBASIC2.5□□□□□ -2.01
RTN3O95197 RNU6-1148P-201ENST00000410992 104 ntBASIC2.5□□□□□ -2.01
RTN3O95197 EDDM3CP-201ENST00000415977 425 ntBASIC2.5□□□□□ -2.01
RTN3O95197 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN3O95197 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.5□□□□□ -2.01
RTN3O95197 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.5□□□□□ -2.01
RTN3O95197 AC087241.2-201ENST00000535801 324 ntBASIC2.5□□□□□ -2.01
RTN3O95197 MIR3942-201ENST00000585264 109 ntBASIC2.5□□□□□ -2.01
RTN3O95197 AC060780.3-201ENST00000589464 80 ntBASIC2.5□□□□□ -2.01
RTN3O95197 AL078605.1-201ENST00000603529 500 ntBASIC2.5□□□□□ -2.01
RTN3O95197 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
RTN3O95197 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
RTN3O95197 AL160394.1-201ENST00000624765 724 ntBASIC2.5□□□□□ -2.01
RTN3O95197 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTN3O95197 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTN3O95197 Y_RNA.86-201ENST00000363020 111 ntBASIC2.49□□□□□ -2.01
RTN3O95197 SNORD116-11-201ENST00000383882 92 ntBASIC2.49□□□□□ -2.01
RTN3O95197 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms