Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RPL31P3-201ENST00000458430 332 ntBASIC0.67□□□□□ -2.3
PCF11O94913 SNORD124-201ENST00000459577 104 ntBASIC0.67□□□□□ -2.3
PCF11O94913 RPS26P45-201ENST00000471748 340 ntBASIC0.67□□□□□ -2.3
PCF11O94913 AC113347.3-201ENST00000509113 148 ntBASIC0.67□□□□□ -2.3
PCF11O94913 RNA5SP503-201ENST00000517047 117 ntBASIC0.67□□□□□ -2.3
PCF11O94913 BNIP3P6-201ENST00000549284 499 ntBASIC0.67□□□□□ -2.3
PCF11O94913 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.67□□□□□ -2.3
PCF11O94913 AC069114.2-201ENST00000604699 304 ntBASIC0.67□□□□□ -2.3
PCF11O94913 AC012557.2-201ENST00000605919 418 ntBASIC0.67□□□□□ -2.3
PCF11O94913 AL355816.2-201ENST00000610049 647 ntBASIC0.67□□□□□ -2.3
PCF11O94913 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.67□□□□□ -2.3
PCF11O94913 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MIR19B1-201ENST00000384829 87 ntBASIC0.66□□□□□ -2.3
PCF11O94913 FCF1P10-201ENST00000407590 479 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MIR1284-201ENST00000408337 120 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.66□□□□□ -2.3
PCF11O94913 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.66□□□□□ -2.3
PCF11O94913 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.66□□□□□ -2.3
PCF11O94913 RNU6-1028P-201ENST00000517164 93 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC115990.1-201ENST00000526957 301 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC099785.1-201ENST00000605697 437 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC130324.3-201ENST00000614165 542 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
PCF11O94913 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.66□□□□□ -2.3
PCF11O94913 MTCO3P41-201ENST00000414801 328 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MTCO1P21-201ENST00000416634 589 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MTCO3P29-201ENST00000432119 779 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.66□□□□□ -2.3
PCF11O94913 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.66□□□□□ -2.3
PCF11O94913 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.66□□□□□ -2.3
PCF11O94913 AC145146.1-201ENST00000496370 254 ntBASIC0.66□□□□□ -2.3
PCF11O94913 PSMC1P5-201ENST00000512850 177 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.66□□□□□ -2.3
PCF11O94913 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.66□□□□□ -2.3
PCF11O94913 MTCYBP33-201ENST00000575007 1130 ntBASIC0.66□□□□□ -2.3
PCF11O94913 AC024940.5-201ENST00000622889 474 ntBASIC0.66□□□□□ -2.3
PCF11O94913 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PCF11O94913 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.65□□□□□ -2.31
PCF11O94913 ARL5AP1-201ENST00000418991 388 ntBASIC0.65□□□□□ -2.31
PCF11O94913 RSL24D1P8-201ENST00000434442 492 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PCF11O94913 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.65□□□□□ -2.31
PCF11O94913 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.65□□□□□ -2.31
PCF11O94913 RNU5F-2P-201ENST00000516066 82 ntBASIC0.65□□□□□ -2.31
PCF11O94913 SNORA43.2-201ENST00000516652 128 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.65□□□□□ -2.31
PCF11O94913 AC087894.1-201ENST00000538359 518 ntBASIC0.65□□□□□ -2.31
PCF11O94913 VN1R82P-201ENST00000601481 356 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AL022154.1-201ENST00000604698 785 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AC018889.1-201ENST00000605372 397 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AC024060.1-201ENST00000607052 494 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AL365434.2-201ENST00000607979 234 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AC068880.4-201ENST00000623082 495 ntBASIC0.65□□□□□ -2.31
PCF11O94913 AL589826.1-201ENST00000340697 249 ntBASIC0.64□□□□□ -2.31
PCF11O94913 RNU6-462P-201ENST00000362659 105 ntBASIC0.64□□□□□ -2.31
PCF11O94913 RNA5SP368-201ENST00000364298 116 ntBASIC0.64□□□□□ -2.31
PCF11O94913 RNU6-43P-201ENST00000384302 107 ntBASIC0.64□□□□□ -2.31
PCF11O94913 MTCO2P1-201ENST00000424648 477 ntBASIC0.64□□□□□ -2.31
PCF11O94913 GTF2IP13-201ENST00000438487 386 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.64□□□□□ -2.31
PCF11O94913 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
PCF11O94913 snoU13.27-201ENST00000459278 104 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AC022447.4-201ENST00000504053 364 ntBASIC0.64□□□□□ -2.31
PCF11O94913 Y_RNA.689-201ENST00000516589 107 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
PCF11O94913 LRRC6P1-201ENST00000532188 885 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.64□□□□□ -2.31
PCF11O94913 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AP002802.2-201ENST00000605877 235 ntBASIC0.64□□□□□ -2.31
PCF11O94913 RNU6-88P-201ENST00000606801 100 ntBASIC0.64□□□□□ -2.31
PCF11O94913 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.64□□□□□ -2.31
PCF11O94913 SNORD56.1-201ENST00000362913 68 ntBASIC0.63□□□□□ -2.31
PCF11O94913 SNORA50A-201ENST00000384225 134 ntBASIC0.63□□□□□ -2.31
PCF11O94913 Y_RNA.578-201ENST00000390903 88 ntBASIC0.63□□□□□ -2.31
PCF11O94913 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
PCF11O94913 COX6CP10-201ENST00000416832 224 ntBASIC0.63□□□□□ -2.31
PCF11O94913 MTND4P20-201ENST00000424125 869 ntBASIC0.63□□□□□ -2.31
PCF11O94913 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.63□□□□□ -2.31
PCF11O94913 AC099677.2-201ENST00000436385 175 ntBASIC0.63□□□□□ -2.31
PCF11O94913 MTND4P15-201ENST00000437913 1033 ntBASIC0.63□□□□□ -2.31
PCF11O94913 AL122001.1-201ENST00000457027 370 ntBASIC0.63□□□□□ -2.31
PCF11O94913 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.63□□□□□ -2.31
PCF11O94913 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.63□□□□□ -2.31
PCF11O94913 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.63□□□□□ -2.31
PCF11O94913 MTCO2P2-201ENST00000591258 225 ntBASIC0.63□□□□□ -2.31
PCF11O94913 AC124016.2-201ENST00000610058 665 ntBASIC0.63□□□□□ -2.31
PCF11O94913 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.63□□□□□ -2.31
PCF11O94913 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.63□□□□□ -2.31
PCF11O94913 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.63□□□□□ -2.31
PCF11O94913 RNU6-960P-201ENST00000364056 120 ntBASIC0.62□□□□□ -2.31
PCF11O94913 RNU6-777P-201ENST00000364265 104 ntBASIC0.62□□□□□ -2.31
PCF11O94913 SNORA63D-201ENST00000364359 132 ntBASIC0.62□□□□□ -2.31
PCF11O94913 SMIM11P1-201ENST00000369586 178 ntBASIC0.62□□□□□ -2.31
PCF11O94913 RNU6-224P-201ENST00000384055 107 ntBASIC0.62□□□□□ -2.31
PCF11O94913 ELOCP17-201ENST00000414751 326 ntBASIC0.62□□□□□ -2.31
PCF11O94913 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.62□□□□□ -2.31
PCF11O94913 ELOCP9-201ENST00000418624 239 ntBASIC0.62□□□□□ -2.31
PCF11O94913 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms