Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SNORD14.1-201ENST00000365609 90 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 Y_RNA.389-201ENST00000383924 113 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RNU6-463P-201ENST00000384340 107 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 Y_RNA.557-201ENST00000384680 107 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 MIR568-201ENST00000385036 95 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 MIR1252-201ENST00000408861 65 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RNU6-101P-201ENST00000410323 104 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AC096644.2-201ENST00000429278 159 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RPL39P29-201ENST00000447779 157 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AC109925.1-201ENST00000478069 331 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 RPL22P13-201ENST00000493291 347 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS4BO75351 MTCO2P24-201ENST00000515611 426 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS4BO75351 HSPE1P4-201ENST00000550617 308 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 HSBP1P1-201ENST00000555205 166 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS4BO75351 AL355297.3-201ENST00000604082 446 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 PRR13P7-201ENST00000605538 430 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS4BO75351 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
VPS4BO75351 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS4BO75351 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VPS4BO75351 Y_RNA.424-201ENST00000384063 103 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 Y_RNA.605-201ENST00000410577 105 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 MTCYBP9-201ENST00000431021 303 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC009296.1-201ENST00000443146 155 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS4BO75351 AL353705.4-201ENST00000449661 238 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 snoU13.14-201ENST00000459372 104 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC107626.1-201ENST00000471084 183 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS4BO75351 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC109329.1-201ENST00000518744 317 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC040926.1-201ENST00000530195 238 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS4BO75351 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC006600.1-201ENST00000572529 153 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 AP000942.4-201ENST00000604811 241 ntBASIC3.05□□□□□ -1.92
VPS4BO75351 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS4BO75351 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS4BO75351 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS4BO75351 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS4BO75351 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 RNA5SP126-201ENST00000365092 109 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 SNORA63.7-201ENST00000365579 123 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS4BO75351 U8.10-201ENST00000384260 133 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 Y_RNA.526-201ENST00000384572 110 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 MTCO3P19-201ENST00000415864 321 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC244670.1-201ENST00000436879 112 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS4BO75351 AC012308.1-201ENST00000451232 178 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS4BO75351 AC010655.3-201ENST00000478818 450 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS4BO75351 Y_RNA.706-201ENST00000516933 99 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 Y_RNA.715-201ENST00000517082 110 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 MIR2355-201ENST00000517199 87 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC115990.1-201ENST00000526957 301 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC007375.1-201ENST00000554513 578 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC124312.5-201ENST00000604451 268 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AL132822.1-201ENST00000617063 513 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 AC007792.1-201ENST00000623023 402 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS4BO75351 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS4BO75351 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS4BO75351 AL035425.3-201ENST00000564206 4996 ntBASIC3.04□□□□□ -1.92
VPS4BO75351 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS4BO75351 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4BO75351 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS4BO75351 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS4BO75351 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 Y_RNA.276-201ENST00000364732 109 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 RNA5SP213-201ENST00000391031 106 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 RPS26P42-201ENST00000413485 326 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4BO75351 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4BO75351 AC107083.1-201ENST00000439643 279 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 AC073910.1-201ENST00000445047 438 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4BO75351 RNU7-169P-201ENST00000459456 61 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 AC087477.1-201ENST00000465747 340 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 MTATP8P1-201ENST00000467115 207 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms