Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNX2O60749 RNU7-26P-201ENST00000458980 63 ntBASIC2.96□□□□□ -1.94
SNX2O60749 RPL17P19-201ENST00000489069 552 ntBASIC2.96□□□□□ -1.94
SNX2O60749 AC090096.1-201ENST00000489168 390 ntBASIC2.96□□□□□ -1.94
SNX2O60749 AC105758.1-201ENST00000506038 399 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.661-201ENST00000516003 99 ntBASIC2.96□□□□□ -1.94
SNX2O60749 RNU6-264P-201ENST00000517134 104 ntBASIC2.96□□□□□ -1.94
SNX2O60749 HSPE1P4-201ENST00000550617 308 ntBASIC2.96□□□□□ -1.94
SNX2O60749 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX2O60749 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.812-201ENST00000610788 101 ntBASIC2.96□□□□□ -1.94
SNX2O60749 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.784-201ENST00000613803 101 ntBASIC2.96□□□□□ -1.94
SNX2O60749 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.787-201ENST00000616522 101 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.780-201ENST00000617336 101 ntBASIC2.96□□□□□ -1.94
SNX2O60749 Y_RNA.801-201ENST00000619005 101 ntBASIC2.96□□□□□ -1.94
SNX2O60749 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX2O60749 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX2O60749 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SNX2O60749 OR56A5-201ENST00000340110 738 ntBASIC2.95□□□□□ -1.94
SNX2O60749 Y_RNA.252-201ENST00000364556 101 ntBASIC2.95□□□□□ -1.94
SNX2O60749 SNORA36A-201ENST00000384221 132 ntBASIC2.95□□□□□ -1.94
SNX2O60749 SNORA44-201ENST00000384584 132 ntBASIC2.95□□□□□ -1.94
SNX2O60749 RNU6-1222P-201ENST00000384615 107 ntBASIC2.95□□□□□ -1.94
SNX2O60749 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SNX2O60749 Z82188.1-201ENST00000436709 154 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AL035666.1-201ENST00000446195 348 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AL118496.2-201ENST00000448300 230 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX2O60749 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
SNX2O60749 SNORA25.11-201ENST00000515935 105 ntBASIC2.95□□□□□ -1.94
SNX2O60749 SUB1P3-201ENST00000564581 315 ntBASIC2.95□□□□□ -1.94
SNX2O60749 MIR5701-3-201ENST00000578890 82 ntBASIC2.95□□□□□ -1.94
SNX2O60749 MIR5701-1-201ENST00000585138 82 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX2O60749 MIR5701-2-201ENST00000615634 82 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AC007485.1-201ENST00000616755 206 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AC091925.1-201ENST00000623204 462 ntBASIC2.95□□□□□ -1.94
SNX2O60749 AL450472.1-202ENST00000637286 180 ntBASIC2.95□□□□□ -1.94
SNX2O60749 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
SNX2O60749 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SNX2O60749 Y_RNA.28-201ENST00000362554 111 ntBASIC2.94□□□□□ -1.94
SNX2O60749 Y_RNA.40-201ENST00000362645 93 ntBASIC2.94□□□□□ -1.94
SNX2O60749 RNU6-1285P-201ENST00000363480 105 ntBASIC2.94□□□□□ -1.94
SNX2O60749 RNU6-1141P-201ENST00000364520 107 ntBASIC2.94□□□□□ -1.94
SNX2O60749 Y_RNA.504-201ENST00000384481 104 ntBASIC2.94□□□□□ -1.94
SNX2O60749 RNU6-1072P-201ENST00000384703 107 ntBASIC2.94□□□□□ -1.94
SNX2O60749 RNU6-443P-201ENST00000384780 107 ntBASIC2.94□□□□□ -1.94
SNX2O60749 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AL590004.1-201ENST00000405321 300 ntBASIC2.94□□□□□ -1.94
SNX2O60749 RNA5SP494-201ENST00000410653 129 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AC008267.5-201ENST00000424928 265 ntBASIC2.94□□□□□ -1.94
SNX2O60749 MTCO3P29-201ENST00000432119 779 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX2O60749 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX2O60749 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AL442663.2-201ENST00000554385 511 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AC027176.1-201ENST00000560204 514 ntBASIC2.94□□□□□ -1.94
SNX2O60749 AC040896.1-201ENST00000613819 479 ntBASIC2.94□□□□□ -1.94
SNX2O60749 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX2O60749 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX2O60749 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX2O60749 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX2O60749 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX2O60749 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNX2O60749 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX2O60749 SNORD114-19-201ENST00000363072 75 ntBASIC2.93□□□□□ -1.94
SNX2O60749 Y_RNA.148-201ENST00000363557 117 ntBASIC2.93□□□□□ -1.94
SNX2O60749 U3.13-201ENST00000364804 214 ntBASIC2.93□□□□□ -1.94
SNX2O60749 RNY1P14-201ENST00000384426 108 ntBASIC2.93□□□□□ -1.94
SNX2O60749 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC138623.1-201ENST00000418060 216 ntBASIC2.93□□□□□ -1.94
SNX2O60749 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX2O60749 AL160004.2-201ENST00000432935 350 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX2O60749 AC025750.2-201ENST00000442609 450 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.93□□□□□ -1.94
SNX2O60749 AL513124.1-201ENST00000450410 614 ntBASIC2.93□□□□□ -1.94
SNX2O60749 GSTA11P-201ENST00000452866 669 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AP001486.1-201ENST00000463339 476 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC112771.1-201ENST00000463581 102 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC117440.1-201ENST00000474107 571 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC104564.1-201ENST00000493028 407 ntBASIC2.93□□□□□ -1.94
SNX2O60749 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX2O60749 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.93□□□□□ -1.94
SNX2O60749 RN7SKP295-201ENST00000517264 153 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC109329.1-201ENST00000518744 317 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX2O60749 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX2O60749 LARP7P3-201ENST00000579888 337 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC010928.2-201ENST00000588017 287 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AL356157.2-201ENST00000605122 111 ntBASIC2.93□□□□□ -1.94
SNX2O60749 MIR1244-1-201ENST00000612829 85 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AL159153.1-201ENST00000619688 317 ntBASIC2.93□□□□□ -1.94
SNX2O60749 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
SNX2O60749 MIR1244-3-201ENST00000635744 85 ntBASIC2.93□□□□□ -1.94
SNX2O60749 MIR1244-2-201ENST00000636449 85 ntBASIC2.93□□□□□ -1.94
SNX2O60749 MIR1244-4-202ENST00000636813 85 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms