Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNA5SP282-201ENST00000516355 108 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
CTNND1O60716 MIR3136-201ENST00000583498 78 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 AC104984.5-201ENST00000586878 94 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 AC060766.3-201ENST00000591442 263 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTNND1O60716 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNND1O60716 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNND1O60716 MTND4P27-201ENST00000450813 1354 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNND1O60716 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNND1O60716 AC233981.2-201ENST00000611524 1614 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 Y_RNA.11-201ENST00000362375 109 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNU6-461P-201ENST00000364195 107 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNU6-1286P-201ENST00000383871 107 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNU6-968P-201ENST00000384076 107 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 Y_RNA.431-201ENST00000384086 102 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 SNORA26.3-201ENST00000391119 136 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 CBX3P9-201ENST00000402326 552 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 MIR1261-201ENST00000408659 82 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AL590135.1-201ENST00000422215 156 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC019205.3-201ENST00000424573 156 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 MTND4P28-201ENST00000426217 387 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNND1O60716 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
CTNND1O60716 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNND1O60716 AC016700.2-201ENST00000446011 156 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 ELOCP24-201ENST00000456370 334 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.13□□□□□ -1.91
CTNND1O60716 RPL23AP70-201ENST00000483361 460 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC015911.1-201ENST00000495111 156 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNA5SP76-201ENST00000516277 87 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNA5SP384-201ENST00000516615 116 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 MRPS36P4-201ENST00000534436 298 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNND1O60716 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 MIR5571-201ENST00000577998 113 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 MIR3605-201ENST00000583214 100 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 AC069294.1-201ENST00000608397 350 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 HMGB1P24-202ENST00000615653 685 ntBASIC3.13□□□□□ -1.91
CTNND1O60716 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.13□□□□□ -1.91
CTNND1O60716 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNND1O60716 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNND1O60716 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTNND1O60716 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CTNND1O60716 MIR627-201ENST00000384979 97 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNND1O60716 MTCO3P10-201ENST00000455912 772 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNND1O60716 AC080013.2-201ENST00000460866 323 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AC073901.1-201ENST00000462471 408 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNND1O60716 HMGB1P35-201ENST00000503360 598 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNND1O60716 RNU1-41P-201ENST00000516161 162 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 RNU1-48P-201ENST00000516400 162 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.12□□□□□ -1.91
CTNND1O60716 MIR3616-201ENST00000584070 92 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 RPL30P11-203ENST00000598995 310 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AL627309.6-201ENST00000606857 840 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AL359314.1-201ENST00000616913 261 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 SNORD98-201ENST00000636377 67 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 AL450472.1-202ENST00000637286 180 ntBASIC3.12□□□□□ -1.91
CTNND1O60716 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CTNND1O60716 Y_RNA.48-201ENST00000362710 103 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 Y_RNA.187-201ENST00000363918 113 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 SNORD56.5-201ENST00000364281 72 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 SET-203ENST00000372688 801 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNND1O60716 SNORA29-201ENST00000384183 140 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 Y_RNA.533-201ENST00000384596 114 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 SNORA41-201ENST00000384675 132 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 RPL23AP50-201ENST00000434149 455 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 RNU7-152P-201ENST00000458982 64 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AC008413.1-201ENST00000511864 177 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 SCARNA16.2-201ENST00000516520 172 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 CBX3P8-201ENST00000532412 525 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.11□□□□□ -1.91
CTNND1O60716 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.11□□□□□ -1.91
CTNND1O60716 MIR3117-201ENST00000584034 78 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AL158827.2-201ENST00000602494 330 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AL133255.1-201ENST00000606374 441 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AL050343.2-201ENST00000607338 280 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 MIR6715A-201ENST00000615929 79 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AC090574.1-201ENST00000623186 233 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 CTSLP2-204ENST00000629029 392 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AL691447.3-201ENST00000635020 330 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTNND1O60716 ZNF299P-201ENST00000406845 1804 ntBASIC3.11□□□□□ -1.91
CTNND1O60716 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CTNND1O60716 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTNND1O60716 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTNND1O60716 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNND1O60716 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CTNND1O60716 AC006026.1-201ENST00000444025 1803 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms