Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC007485.1-201ENST00000616755 206 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 MIR622-201ENST00000638396 96 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.93
PHGDHO43175 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 Y_RNA.202-201ENST00000364083 110 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 RNU6-461P-201ENST00000364195 107 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 RNA5SP267-201ENST00000364893 126 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 SNORA54-201ENST00000384281 123 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 MIR153-2-201ENST00000385225 87 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 MIR190B-201ENST00000401119 79 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 AL590556.1-201ENST00000423231 483 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.96□□□□□ -1.94
PHGDHO43175 OR2AQ1P-201ENST00000451972 200 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.96□□□□□ -1.94
PHGDHO43175 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.96□□□□□ -1.94
PHGDHO43175 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PHGDHO43175 MTND4P1-201ENST00000457501 1466 ntBASIC2.96□□□□□ -1.94
PHGDHO43175 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PHGDHO43175 RNU4-15P-201ENST00000362613 141 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 Y_RNA.148-201ENST00000363557 117 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 Y_RNA.162-201ENST00000363683 102 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 RNY1P14-201ENST00000384426 108 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 RNA5SP120-201ENST00000410900 112 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.95□□□□□ -1.94
PHGDHO43175 GSTA11P-201ENST00000452866 669 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.95□□□□□ -1.94
PHGDHO43175 AC117440.1-201ENST00000474107 571 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 RPS29P2-201ENST00000479278 136 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 RN7SL504P-201ENST00000494496 287 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 AC145146.1-201ENST00000496370 254 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PHGDHO43175 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.95□□□□□ -1.94
PHGDHO43175 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.95□□□□□ -1.94
PHGDHO43175 RNU6-988P-201ENST00000519081 107 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.95□□□□□ -1.94
PHGDHO43175 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.95□□□□□ -1.94
PHGDHO43175 AC092447.9-201ENST00000603395 144 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 AC016925.2-201ENST00000605108 242 ntBASIC2.95□□□□□ -1.94
PHGDHO43175 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
PHGDHO43175 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PHGDHO43175 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHGDHO43175 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.94□□□□□ -1.94
PHGDHO43175 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHGDHO43175 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-874P-201ENST00000362390 105 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU1-72P-201ENST00000362976 153 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNY3P11-201ENST00000364153 102 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 SNORA33.2-201ENST00000365413 134 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 SET-203ENST00000372688 801 ntTSL 2 BASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-17P-201ENST00000384245 107 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-18P-201ENST00000384527 107 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-541P-201ENST00000384709 110 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNVU1-14-201ENST00000384770 164 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-1093P-201ENST00000391194 107 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 Y_RNA.605-201ENST00000410577 105 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 HMGB3P2-201ENST00000411913 584 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 MCFD2P1-201ENST00000417812 300 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.94□□□□□ -1.94
PHGDHO43175 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.94□□□□□ -1.94
PHGDHO43175 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 MTND4P19-201ENST00000446659 478 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU7-87P-201ENST00000459343 62 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU7-169P-201ENST00000459456 61 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 RNU6-1137P-201ENST00000517073 99 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.94□□□□□ -1.94
PHGDHO43175 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
PHGDHO43175 MIR3117-201ENST00000584034 78 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 AL713866.2-201ENST00000603579 219 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.94□□□□□ -1.94
PHGDHO43175 AC091925.1-201ENST00000623204 462 ntBASIC2.94□□□□□ -1.94
PHGDHO43175 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.94□□□□□ -1.94
PHGDHO43175 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHGDHO43175 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PHGDHO43175 Y_RNA.80-201ENST00000362996 102 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 RNU6-1032P-201ENST00000384100 107 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 U8.10-201ENST00000384260 133 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 Y_RNA.485-201ENST00000384395 102 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 MIR29B2-201ENST00000385055 81 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 UBA52P6-201ENST00000399822 382 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.93□□□□□ -1.94
PHGDHO43175 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.93□□□□□ -1.94
PHGDHO43175 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.93□□□□□ -1.94
PHGDHO43175 AC080013.2-201ENST00000460866 323 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AC090515.1-201ENST00000465295 476 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.93□□□□□ -1.94
PHGDHO43175 AC144568.1-201ENST00000520139 137 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.93□□□□□ -1.94
PHGDHO43175 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
PHGDHO43175 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AL360085.1-201ENST00000604713 532 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AL138963.2-201ENST00000605137 226 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 AC083806.3-201ENST00000614016 455 ntBASIC2.93□□□□□ -1.94
PHGDHO43175 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHGDHO43175 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PHGDHO43175 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms