Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC016700.2-201ENST00000446011 156 ntBASIC2.32□□□□□ -2.04
TO15178 AC107399.1-201ENST00000451226 265 ntBASIC2.32□□□□□ -2.04
TO15178 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.32□□□□□ -2.04
TO15178 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.32□□□□□ -2.04
TO15178 AC015911.1-201ENST00000495111 156 ntBASIC2.32□□□□□ -2.04
TO15178 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
TO15178 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.32□□□□□ -2.04
TO15178 MTND5P5-201ENST00000503764 376 ntBASIC2.32□□□□□ -2.04
TO15178 AC091874.1-201ENST00000511402 339 ntBASIC2.32□□□□□ -2.04
TO15178 PTP4A1P4-201ENST00000512479 322 ntBASIC2.32□□□□□ -2.04
TO15178 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.32□□□□□ -2.04
TO15178 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
TO15178 ACA59.1-201ENST00000515966 143 ntBASIC2.32□□□□□ -2.04
TO15178 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
TO15178 AC016256.1-201ENST00000547971 354 ntBASIC2.32□□□□□ -2.04
TO15178 IMMP1LP2-201ENST00000552954 492 ntBASIC2.32□□□□□ -2.04
TO15178 AL121579.1-201ENST00000555129 305 ntBASIC2.32□□□□□ -2.04
TO15178 AC021231.3-201ENST00000558497 370 ntBASIC2.32□□□□□ -2.04
TO15178 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
TO15178 AC006023.1-201ENST00000603944 259 ntBASIC2.32□□□□□ -2.04
TO15178 AL034555.1-201ENST00000604816 211 ntBASIC2.32□□□□□ -2.04
TO15178 MIR3976-201ENST00000606807 139 ntBASIC2.32□□□□□ -2.04
TO15178 AL355073.2-201ENST00000612106 557 ntBASIC2.32□□□□□ -2.04
TO15178 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.32□□□□□ -2.04
TO15178 MIR6817-201ENST00000615588 66 ntBASIC2.32□□□□□ -2.04
TO15178 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
TO15178 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TO15178 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TO15178 Y_RNA.111-201ENST00000363248 100 ntBASIC2.31□□□□□ -2.04
TO15178 Y_RNA.123-201ENST00000363338 102 ntBASIC2.31□□□□□ -2.04
TO15178 SNORD81.2-201ENST00000365153 76 ntBASIC2.31□□□□□ -2.04
TO15178 MIR95-201ENST00000385072 81 ntBASIC2.31□□□□□ -2.04
TO15178 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TO15178 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
TO15178 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
TO15178 PDCL2P1-201ENST00000419302 352 ntBASIC2.31□□□□□ -2.04
TO15178 HMGB1P18-201ENST00000438801 619 ntBASIC2.31□□□□□ -2.04
TO15178 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.31□□□□□ -2.04
TO15178 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.31□□□□□ -2.04
TO15178 RNU6-567P-201ENST00000516746 107 ntBASIC2.31□□□□□ -2.04
TO15178 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.31□□□□□ -2.04
TO15178 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
TO15178 UBE2V2P2-201ENST00000587677 504 ntBASIC2.31□□□□□ -2.04
TO15178 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.31□□□□□ -2.04
TO15178 AL355297.2-201ENST00000604792 129 ntBASIC2.31□□□□□ -2.04
TO15178 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.31□□□□□ -2.04
TO15178 MIR6128-201ENST00000615528 109 ntBASIC2.31□□□□□ -2.04
TO15178 SCARNA15.3-201ENST00000626315 122 ntBASIC2.31□□□□□ -2.04
TO15178 SCARNA4.1-201ENST00000628597 123 ntBASIC2.31□□□□□ -2.04
TO15178 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TO15178 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TO15178 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
TO15178 snoU2_19.1-201ENST00000362361 80 ntBASIC2.3□□□□□ -2.04
TO15178 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
TO15178 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
TO15178 SNORA26.3-201ENST00000391119 136 ntBASIC2.3□□□□□ -2.04
TO15178 MIR548F5-201ENST00000408421 86 ntBASIC2.3□□□□□ -2.04
TO15178 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.3□□□□□ -2.04
TO15178 RPS12P2-201ENST00000439728 269 ntBASIC2.3□□□□□ -2.04
TO15178 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.3□□□□□ -2.04
TO15178 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.3□□□□□ -2.04
TO15178 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.3□□□□□ -2.04
TO15178 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.3□□□□□ -2.04
TO15178 AL353752.1-201ENST00000454946 260 ntBASIC2.3□□□□□ -2.04
TO15178 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.3□□□□□ -2.04
TO15178 AC103851.1-201ENST00000506833 274 ntBASIC2.3□□□□□ -2.04
TO15178 RNA5SP148-201ENST00000516527 94 ntBASIC2.3□□□□□ -2.04
TO15178 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.3□□□□□ -2.04
TO15178 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
TO15178 AC069528.2-201ENST00000624849 1991 ntBASIC2.29□□□□□ -2.04
TO15178 RNU6-593P-201ENST00000364716 112 ntBASIC2.29□□□□□ -2.04
TO15178 Y_RNA.303-201ENST00000364998 94 ntBASIC2.29□□□□□ -2.04
TO15178 RNU6-1032P-201ENST00000384100 107 ntBASIC2.29□□□□□ -2.04
TO15178 RNU6-784P-201ENST00000384330 106 ntBASIC2.29□□□□□ -2.04
TO15178 RNU6-306P-201ENST00000384617 107 ntBASIC2.29□□□□□ -2.04
TO15178 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.29□□□□□ -2.04
TO15178 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.29□□□□□ -2.04
TO15178 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
TO15178 RPS3AP52-201ENST00000435639 297 ntBASIC2.29□□□□□ -2.04
TO15178 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.29□□□□□ -2.04
TO15178 MTND4P18-201ENST00000447010 465 ntBASIC2.29□□□□□ -2.04
TO15178 AC116337.1-201ENST00000509680 687 ntBASIC2.29□□□□□ -2.04
TO15178 Y_RNA.691-201ENST00000516611 103 ntBASIC2.29□□□□□ -2.04
TO15178 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TO15178 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
TO15178 FGF7P1-201ENST00000582820 288 ntBASIC2.29□□□□□ -2.04
TO15178 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
TO15178 AC243960.4-201ENST00000600532 288 ntBASIC2.29□□□□□ -2.04
TO15178 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
TO15178 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.29□□□□□ -2.04
TO15178 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.29□□□□□ -2.04
TO15178 SNORA43.4-201ENST00000629559 138 ntBASIC2.29□□□□□ -2.04
TO15178 TPTEP1-208ENST00000636884 213 ntBASIC2.29□□□□□ -2.04
TO15178 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TO15178 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TO15178 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TO15178 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
TO15178 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TO15178 Y_RNA.184-201ENST00000363884 108 ntBASIC2.28□□□□□ -2.04
TO15178 Y_RNA.339-201ENST00000365325 102 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms