Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IGKV3-31-201ENST00000523109 329 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 AC118273.2-201ENST00000532092 465 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 MIR3126-201ENST00000577443 74 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN4O14493 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN4O14493 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CLDN4O14493 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN4O14493 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN4O14493 RNU4-15P-201ENST00000362613 141 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN4O14493 RNU6-142P-201ENST00000384019 107 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 ZNF885P-201ENST00000420174 1098 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AL513185.2-201ENST00000425543 193 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN4O14493 GPM6BP3-201ENST00000442797 145 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN4O14493 AC145146.1-201ENST00000496370 254 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN4O14493 RNU6-256P-201ENST00000516747 97 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 RNU6-1314P-201ENST00000517139 104 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC034114.1-201ENST00000520293 285 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 DEFB122-202ENST00000569013 197 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN4O14493 AC078795.3-201ENST00000602913 472 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC122108.2-201ENST00000611946 526 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
CLDN4O14493 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN4O14493 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN4O14493 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN4O14493 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN4O14493 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 SNORA36A-201ENST00000384221 132 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 RNU6-933P-201ENST00000384424 107 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN4O14493 Y_RNA.599-201ENST00000410489 109 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 USP9YP28-201ENST00000435142 589 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN4O14493 RPS29P27-201ENST00000463711 170 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 MTCO1P29-201ENST00000496868 288 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN4O14493 AC096745.1-201ENST00000509945 370 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN4O14493 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN4O14493 AP000889.2-201ENST00000532684 490 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CLDN4O14493 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN4O14493 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN4O14493 AC022202.1-201ENST00000613515 211 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN4O14493 SNORA43.4-201ENST00000629559 138 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
CLDN4O14493 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN4O14493 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
CLDN4O14493 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN4O14493 MIR521-1-201ENST00000384902 87 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 SNORA46.1-201ENST00000391069 153 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 SNORA26.3-201ENST00000391119 136 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 SNORA12-201ENST00000391162 147 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN4O14493 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 EDDM3CP-201ENST00000415977 425 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.18□□□□□ -2.06
CLDN4O14493 NFU1P2-201ENST00000448700 469 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AL353705.4-201ENST00000449661 238 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 RNU7-187P-201ENST00000458985 68 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC104564.1-201ENST00000493028 407 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC114801.2-201ENST00000503825 781 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 RNU6-273P-201ENST00000516937 96 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 MTND4LP26-201ENST00000518144 282 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC022616.8-201ENST00000533569 253 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 MIR3672-201ENST00000584290 82 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC146944.4-201ENST00000602697 718 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AL078605.1-201ENST00000603529 500 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AL138726.1-201ENST00000614873 333 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 U6atac.1-201ENST00000616025 117 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC002553.4-201ENST00000616896 331 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AC009033.1-201ENST00000624279 431 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 AL450472.1-202ENST00000637286 180 ntBASIC2.18□□□□□ -2.06
CLDN4O14493 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN4O14493 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN4O14493 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CLDN4O14493 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
CLDN4O14493 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN4O14493 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN4O14493 SNORA32.2-201ENST00000384049 122 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 RNU6-1148P-201ENST00000410992 104 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms