Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA20.1-201ENST00000364790 130 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 SNORD14.1-201ENST00000365609 90 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 Y_RNA.515-201ENST00000384535 112 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 SNORA41-201ENST00000384675 132 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AL445529.1-201ENST00000398713 389 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 MIR1302-6-201ENST00000408466 90 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM38O00635 AL117339.3-201ENST00000418733 162 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AL590135.1-201ENST00000422215 156 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC139712.2-201ENST00000424302 339 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC073910.1-201ENST00000445047 438 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 RNU5B-3P-201ENST00000516601 115 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 RNU6-111P-201ENST00000517179 105 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM38O00635 UBL5P2-201ENST00000583788 219 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 RAC1P9-201ENST00000604990 392 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 AC004832.5-201ENST00000608677 401 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM38O00635 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TRIM38O00635 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM38O00635 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRIM38O00635 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM38O00635 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM38O00635 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM38O00635 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM38O00635 RNU6-774P-201ENST00000363238 107 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 RNU6-843P-201ENST00000384454 104 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 SNORD116-20-201ENST00000384529 92 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 Y_RNA.555-201ENST00000384673 110 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM38O00635 PIGPP3-201ENST00000425307 415 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 RPL23AP50-201ENST00000434149 455 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AC099799.1-201ENST00000439809 192 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 RPL23AP58-201ENST00000440453 469 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM38O00635 AL392103.1-201ENST00000447000 198 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 RPL39P38-201ENST00000467018 153 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM38O00635 AC040926.1-201ENST00000530195 238 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AC026371.1-201ENST00000551867 419 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM38O00635 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM38O00635 SUB1P3-201ENST00000564581 315 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM38O00635 MIR5188-201ENST00000583467 113 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AC093732.2-201ENST00000607950 274 ntBASIC3.12□□□□□ -1.91
TRIM38O00635 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM38O00635 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM38O00635 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM38O00635 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM38O00635 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM38O00635 AC138393.1-203ENST00000327086 343 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNU6-858P-201ENST00000362436 107 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNY3P11-201ENST00000364153 102 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 Y_RNA.276-201ENST00000364732 109 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 Y_RNA.314-201ENST00000365114 102 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNU6-214P-201ENST00000384130 107 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 Y_RNA.518-201ENST00000384552 113 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNU6-1093P-201ENST00000391194 107 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNU7-187P-201ENST00000458985 68 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 AC096745.1-201ENST00000509945 370 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 RNA5SP385-201ENST00000515947 110 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM38O00635 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM38O00635 AC025423.5-201ENST00000550230 219 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 SDR42E1P4-201ENST00000620894 481 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM38O00635 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM38O00635 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM38O00635 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
TRIM38O00635 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM38O00635 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM38O00635 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TRIM38O00635 RNU6-105P-201ENST00000363909 104 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 SNORA68.1-201ENST00000364537 132 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 UBE2V1P4-201ENST00000425374 344 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC107083.1-201ENST00000439643 279 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC012308.1-201ENST00000451232 178 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM38O00635 AC133134.1-201ENST00000466800 359 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 HMGB1P35-201ENST00000503360 598 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM38O00635 AC092436.3-201ENST00000511788 257 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 SNORA25.11-201ENST00000515935 105 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 RNU6-377P-201ENST00000515965 102 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC010186.2-204ENST00000537668 439 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC005899.2-201ENST00000584353 90 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 AC012433.1-201ENST00000588916 398 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 MIR7106-201ENST00000612419 65 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms