Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC096644.4-201ENST00000563417 2912 ntBASIC3.04□□□□□ -1.92
FOXN3O00409 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXN3O00409 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
FOXN3O00409 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
FOXN3O00409 snoU2_19.1-201ENST00000362361 80 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 VTRNA1-1-201ENST00000363120 99 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 Y_RNA.145-201ENST00000363527 102 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 RNU6-26P-201ENST00000383985 107 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 Y_RNA.422-201ENST00000384054 114 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 RNU6-968P-201ENST00000384076 107 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 Y_RNA.463-201ENST00000384271 102 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 Y_RNA.533-201ENST00000384596 114 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 Y_RNA.605-201ENST00000410577 105 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 MCFD2P1-201ENST00000417812 300 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXN3O00409 AC008267.5-201ENST00000424928 265 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXN3O00409 MTND3P2-201ENST00000438452 342 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXN3O00409 AL035666.1-201ENST00000446195 348 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 GSTA11P-201ENST00000452866 669 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC016632.1-201ENST00000503994 196 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC022493.2-201ENST00000506122 481 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 SNORA31.16-201ENST00000516773 139 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 RNU6-699P-201ENST00000517081 110 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXN3O00409 AC090616.3-201ENST00000582184 217 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 MIR3117-201ENST00000584034 78 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 RPL30P11-203ENST00000598995 310 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXN3O00409 AC083806.3-201ENST00000614016 455 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AL162274.2-201ENST00000614406 332 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC091925.1-201ENST00000623204 462 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXN3O00409 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXN3O00409 AC135776.4-201ENST00000624300 1904 ntBASIC3.03□□□□□ -1.92
FOXN3O00409 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.03□□□□□ -1.93
FOXN3O00409 Y_RNA.112-201ENST00000363250 102 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 RNU6-1309P-201ENST00000363305 108 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 RNU6-461P-201ENST00000364195 107 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 RNU6-1032P-201ENST00000384100 107 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 Y_RNA.496-201ENST00000384444 101 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
FOXN3O00409 SNORA75.6-201ENST00000391318 127 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 RNU6-174P-201ENST00000410406 106 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 Z92545.1-201ENST00000411782 234 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 HMGN2P35-201ENST00000412164 270 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 EIF4EP4-201ENST00000424916 578 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 AL353997.1-201ENST00000432936 108 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXN3O00409 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXN3O00409 AL353705.4-201ENST00000449661 238 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 MTATP8P1-201ENST00000467115 207 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 S100A11P2-201ENST00000467589 312 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 AC003982.1-202ENST00000469928 248 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXN3O00409 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXN3O00409 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 RNU6-976P-201ENST00000516086 111 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXN3O00409 AC115990.1-201ENST00000526957 301 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXN3O00409 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXN3O00409 SNORD98-201ENST00000636377 67 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 MTND5P9-201ENST00000503854 1755 ntBASIC3.02□□□□□ -1.93
FOXN3O00409 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
FOXN3O00409 AC233981.2-201ENST00000611524 1614 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXN3O00409 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXN3O00409 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXN3O00409 RNU6-142P-201ENST00000384019 107 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 Y_RNA.527-201ENST00000384573 102 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 EEF1A1P41-201ENST00000414667 207 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN3O00409 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXN3O00409 AC243428.1-201ENST00000421099 264 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 USMG5P1-201ENST00000425964 177 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXN3O00409 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXN3O00409 AL121594.1-201ENST00000475906 575 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 CKS1BP2-201ENST00000497342 240 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 RNU5F-2P-201ENST00000516066 82 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 Y_RNA.720-201ENST00000517166 92 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXN3O00409 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXN3O00409 MIR4680-201ENST00000580906 66 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AC105245.1-201ENST00000581934 244 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 MIR4325-201ENST00000583049 90 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AC005000.2-201ENST00000605468 310 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AC107871.2-201ENST00000612894 502 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 AC008121.3-201ENST00000618726 433 ntBASIC3.01□□□□□ -1.93
FOXN3O00409 MIR7157-201ENST00000635801 60 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms