Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.27□□□□□ -2.05
O00370 TRAV32-201ENST00000553993 340 ntBASIC2.27□□□□□ -2.05
O00370 AC093249.1-201ENST00000567049 203 ntBASIC2.27□□□□□ -2.05
O00370 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.27□□□□□ -2.05
O00370 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.27□□□□□ -2.05
O00370 AC009233.1-201ENST00000616477 371 ntBASIC2.27□□□□□ -2.05
O00370 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.27□□□□□ -2.05
O00370 MIR6873-201ENST00000622788 63 ntBASIC2.27□□□□□ -2.05
O00370 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.27□□□□□ -2.05
O00370 MTND4P23-201ENST00000447723 1363 ntBASIC2.26□□□□□ -2.05
O00370 CBX3P1-201ENST00000325243 554 ntBASIC2.26□□□□□ -2.05
O00370 snoU2_19.1-201ENST00000362361 80 ntBASIC2.26□□□□□ -2.05
O00370 RNU6-562P-201ENST00000362731 107 ntBASIC2.26□□□□□ -2.05
O00370 RNU6-655P-201ENST00000362858 107 ntBASIC2.26□□□□□ -2.05
O00370 RNA5SP240-201ENST00000365355 128 ntBASIC2.26□□□□□ -2.05
O00370 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
O00370 RNA5SP390-201ENST00000410191 113 ntBASIC2.26□□□□□ -2.05
O00370 RNU2-23P-201ENST00000410545 195 ntBASIC2.26□□□□□ -2.05
O00370 RNU6-325P-201ENST00000411132 105 ntBASIC2.26□□□□□ -2.05
O00370 AC008267.5-201ENST00000424928 265 ntBASIC2.26□□□□□ -2.05
O00370 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
O00370 MTCO2P3-201ENST00000442543 421 ntBASIC2.26□□□□□ -2.05
O00370 AC010095.1-201ENST00000443543 144 ntBASIC2.26□□□□□ -2.05
O00370 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.26□□□□□ -2.05
O00370 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.26□□□□□ -2.05
O00370 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
O00370 RNU7-187P-201ENST00000458985 68 ntBASIC2.26□□□□□ -2.05
O00370 U8.21-201ENST00000459536 136 ntBASIC2.26□□□□□ -2.05
O00370 RNU6-1037P-201ENST00000459571 107 ntBASIC2.26□□□□□ -2.05
O00370 RPL9P9-202ENST00000466501 579 ntBASIC2.26□□□□□ -2.05
O00370 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.26□□□□□ -2.05
O00370 AC096745.1-201ENST00000509945 370 ntBASIC2.26□□□□□ -2.05
O00370 RNU6-612P-201ENST00000516909 102 ntBASIC2.26□□□□□ -2.05
O00370 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.26□□□□□ -2.05
O00370 COPS8P3-201ENST00000526024 482 ntBASIC2.26□□□□□ -2.05
O00370 CYCSP26-201ENST00000534107 320 ntBASIC2.26□□□□□ -2.05
O00370 HSPE1P4-201ENST00000550617 308 ntBASIC2.26□□□□□ -2.05
O00370 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.26□□□□□ -2.05
O00370 MIR3672-201ENST00000584290 82 ntBASIC2.26□□□□□ -2.05
O00370 BNIP3P16-201ENST00000589779 534 ntBASIC2.26□□□□□ -2.05
O00370 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
O00370 AC002543.1-201ENST00000299783 1954 ntBASIC2.25□□□□□ -2.05
O00370 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
O00370 Y_RNA.212-201ENST00000364177 102 ntBASIC2.25□□□□□ -2.05
O00370 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
O00370 RNU6-128P-201ENST00000383976 107 ntBASIC2.25□□□□□ -2.05
O00370 RNU6-1013P-201ENST00000384180 107 ntBASIC2.25□□□□□ -2.05
O00370 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
O00370 Y_RNA.504-201ENST00000384481 104 ntBASIC2.25□□□□□ -2.05
O00370 RNU6-306P-201ENST00000384617 107 ntBASIC2.25□□□□□ -2.05
O00370 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
O00370 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
O00370 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.25□□□□□ -2.05
O00370 AC096638.1-201ENST00000444678 216 ntBASIC2.25□□□□□ -2.05
O00370 AC013470.1-201ENST00000453438 462 ntBASIC2.25□□□□□ -2.05
O00370 AC130509.1-201ENST00000464158 433 ntBASIC2.25□□□□□ -2.05
O00370 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.25□□□□□ -2.05
O00370 AL117351.2-201ENST00000513571 157 ntBASIC2.25□□□□□ -2.05
O00370 RN7SKP256-201ENST00000517201 314 ntBASIC2.25□□□□□ -2.05
O00370 AC007375.1-201ENST00000554513 578 ntBASIC2.25□□□□□ -2.05
O00370 SCOCP1-201ENST00000554676 349 ntBASIC2.25□□□□□ -2.05
O00370 AC005668.1-201ENST00000571142 476 ntBASIC2.25□□□□□ -2.05
O00370 AC091135.1-201ENST00000585943 307 ntBASIC2.25□□□□□ -2.05
O00370 AC023043.2-201ENST00000589678 1026 ntBASIC2.25□□□□□ -2.05
O00370 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
O00370 RBM11P1-201ENST00000604951 799 ntBASIC2.25□□□□□ -2.05
O00370 AL359757.2-201ENST00000624309 274 ntBASIC2.25□□□□□ -2.05
O00370 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
O00370 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
O00370 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
O00370 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
O00370 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
O00370 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
O00370 AC009541.1-201ENST00000438279 2662 ntBASIC2.24□□□□□ -2.05
O00370 Y_RNA.151-201ENST00000363566 112 ntBASIC2.24□□□□□ -2.05
O00370 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
O00370 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.24□□□□□ -2.05
O00370 RNU6-43P-201ENST00000384302 107 ntBASIC2.24□□□□□ -2.05
O00370 SNORA64-201ENST00000384674 134 ntBASIC2.24□□□□□ -2.05
O00370 MT-TL1-201ENST00000386347 75 ntBASIC2.24□□□□□ -2.05
O00370 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
O00370 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.24□□□□□ -2.05
O00370 UBE2V1P4-201ENST00000425374 344 ntBASIC2.24□□□□□ -2.05
O00370 AC025033.1-201ENST00000463883 194 ntBASIC2.24□□□□□ -2.05
O00370 MTCO2P30-201ENST00000503662 364 ntBASIC2.24□□□□□ -2.05
O00370 PRDX4P1-201ENST00000507189 574 ntBASIC2.24□□□□□ -2.05
O00370 AC091874.1-201ENST00000511402 339 ntBASIC2.24□□□□□ -2.05
O00370 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.24□□□□□ -2.05
O00370 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.24□□□□□ -2.05
O00370 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.24□□□□□ -2.05
O00370 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.24□□□□□ -2.05
O00370 MIR4801-201ENST00000582704 82 ntBASIC2.24□□□□□ -2.05
O00370 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.24□□□□□ -2.05
O00370 MIR3976-201ENST00000606807 139 ntBASIC2.24□□□□□ -2.05
O00370 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
O00370 AL138726.1-201ENST00000614873 333 ntBASIC2.24□□□□□ -2.05
O00370 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.24□□□□□ -2.05
O00370 AP006437.1-201ENST00000641440 3685 ntBASIC2.23□□□□□ -2.05
O00370 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
O00370 RNA5SP432-201ENST00000362480 116 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms