Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR6852-201ENST00000621699 66 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC28A1O00337 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC28A1O00337 AC068137.3-201ENST00000639191 341 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 OR4G1P-203ENST00000641984 1631 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SLC28A1O00337 MIR449A-201ENST00000362113 91 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 RNU6-1164P-201ENST00000364428 107 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 RNU4-75P-201ENST00000364621 146 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 RNU6-1329P-201ENST00000365664 107 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SLC28A1O00337 RNU6-780P-201ENST00000391030 104 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 EIF4E2P1-201ENST00000393781 255 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 RNU6-1068P-201ENST00000410958 103 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC28A1O00337 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC28A1O00337 HMGN2P3-201ENST00000433603 273 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 HMGN2P5-201ENST00000436882 273 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AL359672.1-201ENST00000442302 409 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.88□□□□□ -2.11
SLC28A1O00337 U8.21-201ENST00000459536 136 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AC104564.1-201ENST00000493028 407 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC28A1O00337 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC28A1O00337 CYP4A27P-201ENST00000567218 190 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC28A1O00337 AC243960.4-201ENST00000600532 288 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AC097065.2-201ENST00000608159 533 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
SLC28A1O00337 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 SNORA43.4-201ENST00000629559 138 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 AL450472.1-202ENST00000637286 180 ntBASIC1.88□□□□□ -2.11
SLC28A1O00337 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SLC28A1O00337 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
SLC28A1O00337 RNU1-58P-201ENST00000362413 163 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 RNU6-227P-201ENST00000362865 103 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 Y_RNA.436-201ENST00000384097 102 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 SNORA36A-201ENST00000384221 132 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 MIR597-201ENST00000384968 97 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AL030996.1-201ENST00000411430 235 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC016907.1-201ENST00000419483 435 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 MRPS10P2-201ENST00000431226 381 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 ERLEC1P1-201ENST00000433806 578 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SLC28A1O00337 AC096638.1-201ENST00000444678 216 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.87□□□□□ -2.11
SLC28A1O00337 Y_RNA.704-201ENST00000516851 102 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC28A1O00337 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC025754.2-201ENST00000606491 432 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC004492.1-201ENST00000607036 742 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AL022345.1-201ENST00000607292 135 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC092954.2-201ENST00000609103 430 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 PCGEM1.1-201ENST00000613431 131 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SLC28A1O00337 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SLC28A1O00337 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.87□□□□□ -2.11
SLC28A1O00337 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC28A1O00337 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC28A1O00337 Y_RNA.372-201ENST00000365599 102 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SLC28A1O00337 RNU6-483P-201ENST00000384088 108 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 RNU6-214P-201ENST00000384130 107 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 Y_RNA.500-201ENST00000384466 111 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 MIR208B-201ENST00000401172 77 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 MTCO3P41-201ENST00000414801 328 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SLC28A1O00337 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 DPH3P2-201ENST00000422618 250 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC28A1O00337 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.86□□□□□ -2.11
SLC28A1O00337 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC28A1O00337 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AC005741.1-201ENST00000511094 432 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC28A1O00337 AC025465.4-201ENST00000513422 638 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC28A1O00337 AL157687.1-201ENST00000554853 619 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC28A1O00337 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 CYP2C61P-201ENST00000604072 290 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 RNU6-89P-201ENST00000606519 100 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 DISC2.1-201ENST00000612827 205 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AL136221.1-201ENST00000621449 509 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
SLC28A1O00337 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms