Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.17□□□□□ -2.22
DFFAO00273 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
DFFAO00273 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.17□□□□□ -2.22
DFFAO00273 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.17□□□□□ -2.22
DFFAO00273 VN1R107P-201ENST00000601784 209 ntBASIC1.17□□□□□ -2.22
DFFAO00273 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.17□□□□□ -2.22
DFFAO00273 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
DFFAO00273 SNORD32A-201ENST00000364805 84 ntBASIC1.16□□□□□ -2.22
DFFAO00273 RNU6-438P-201ENST00000365561 103 ntBASIC1.16□□□□□ -2.22
DFFAO00273 SNORA26.3-201ENST00000391119 136 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC011233.1-201ENST00000422812 283 ntBASIC1.16□□□□□ -2.22
DFFAO00273 C8orf59P1-201ENST00000429930 303 ntBASIC1.16□□□□□ -2.22
DFFAO00273 GPR143P-201ENST00000434155 205 ntBASIC1.16□□□□□ -2.22
DFFAO00273 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.16□□□□□ -2.22
DFFAO00273 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.16□□□□□ -2.22
DFFAO00273 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.16□□□□□ -2.22
DFFAO00273 AC005178.1-201ENST00000508392 440 ntBASIC1.16□□□□□ -2.22
DFFAO00273 SNORD60.2-201ENST00000516883 86 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AP003072.2-201ENST00000527756 676 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.16□□□□□ -2.22
DFFAO00273 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.16□□□□□ -2.22
DFFAO00273 HMGB1P33-201ENST00000563485 527 ntBASIC1.16□□□□□ -2.22
DFFAO00273 MIR4498-201ENST00000577599 66 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.16□□□□□ -2.22
DFFAO00273 BNIP3P8-201ENST00000597863 560 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC107304.1-201ENST00000604229 296 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
DFFAO00273 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.15□□□□□ -2.22
DFFAO00273 AC245060.5-201ENST00000610778 3293 ntBASIC1.15□□□□□ -2.22
DFFAO00273 RNY4P34-201ENST00000364779 95 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MIR520A-201ENST00000384862 85 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MIR454-201ENST00000390180 115 ntBASIC1.15□□□□□ -2.23
DFFAO00273 SNORA12.2-201ENST00000391040 156 ntBASIC1.15□□□□□ -2.23
DFFAO00273 RPS29P13-201ENST00000402041 169 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
DFFAO00273 RPS3AP3-201ENST00000411933 242 ntBASIC1.15□□□□□ -2.23
DFFAO00273 Z99497.1-201ENST00000421282 135 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AC078809.1-201ENST00000427601 140 ntBASIC1.15□□□□□ -2.23
DFFAO00273 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.15□□□□□ -2.23
DFFAO00273 HSPE1P9-201ENST00000440046 311 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AC092473.1-201ENST00000441098 221 ntBASIC1.15□□□□□ -2.23
DFFAO00273 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.15□□□□□ -2.23
DFFAO00273 RPL31P3-201ENST00000458430 332 ntBASIC1.15□□□□□ -2.23
DFFAO00273 Y_RNA.638-201ENST00000459374 113 ntBASIC1.15□□□□□ -2.23
DFFAO00273 RPL9P9-202ENST00000466501 579 ntBASIC1.15□□□□□ -2.23
DFFAO00273 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.15□□□□□ -2.23
DFFAO00273 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.15□□□□□ -2.23
DFFAO00273 MTCO3P7-201ENST00000510008 774 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MTCO3P28-201ENST00000513351 515 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.15□□□□□ -2.23
DFFAO00273 SNORD27.1-201ENST00000516319 72 ntBASIC1.15□□□□□ -2.23
DFFAO00273 HSPE1P4-201ENST00000550617 308 ntBASIC1.15□□□□□ -2.23
DFFAO00273 ZNF321P-202ENST00000550843 495 ntBASIC1.15□□□□□ -2.23
DFFAO00273 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.15□□□□□ -2.23
DFFAO00273 MIR3923-201ENST00000579521 83 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MIR548AB-201ENST00000584917 84 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AC069114.2-201ENST00000604699 304 ntBASIC1.15□□□□□ -2.23
DFFAO00273 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
DFFAO00273 Z99289.3-201ENST00000605586 594 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MTND4P4-201ENST00000439033 1366 ntBASIC1.15□□□□□ -2.23
DFFAO00273 ICE2P2-201ENST00000483823 2787 ntBASIC1.15□□□□□ -2.23
DFFAO00273 MTND4P14-201ENST00000435799 1354 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AC092268.1-201ENST00000342691 405 ntBASIC1.14□□□□□ -2.23
DFFAO00273 RNU6-74P-201ENST00000384235 107 ntBASIC1.14□□□□□ -2.23
DFFAO00273 RNU6-360P-201ENST00000390944 104 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.14□□□□□ -2.23
DFFAO00273 AL117339.3-201ENST00000418733 162 ntBASIC1.14□□□□□ -2.23
DFFAO00273 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
DFFAO00273 RPL23AP95-201ENST00000426806 265 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.14□□□□□ -2.23
DFFAO00273 SNAP23P1-201ENST00000433229 246 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AL596276.1-201ENST00000434465 418 ntBASIC1.14□□□□□ -2.23
DFFAO00273 MTCO2P6-201ENST00000463134 685 ntBASIC1.14□□□□□ -2.23
DFFAO00273 TOMM22P6-201ENST00000465035 409 ntBASIC1.14□□□□□ -2.23
DFFAO00273 RNA5SP437-201ENST00000517249 129 ntBASIC1.14□□□□□ -2.23
DFFAO00273 MIR4775-201ENST00000581168 75 ntBASIC1.14□□□□□ -2.23
DFFAO00273 MIR3682-201ENST00000581338 84 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AL356157.2-201ENST00000605122 111 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AC092354.1-201ENST00000606057 376 ntBASIC1.14□□□□□ -2.23
DFFAO00273 PCGEM1.1-201ENST00000613431 131 ntBASIC1.14□□□□□ -2.23
DFFAO00273 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
DFFAO00273 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
DFFAO00273 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
DFFAO00273 AC100821.1-201ENST00000523153 2479 ntBASIC1.13□□□□□ -2.23
DFFAO00273 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
DFFAO00273 U3.9-201ENST00000363823 204 ntBASIC1.13□□□□□ -2.23
DFFAO00273 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
DFFAO00273 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
DFFAO00273 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
DFFAO00273 RNU4-46P-201ENST00000410818 138 ntBASIC1.13□□□□□ -2.23
DFFAO00273 EBAG9P1-201ENST00000418955 543 ntBASIC1.13□□□□□ -2.23
DFFAO00273 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
DFFAO00273 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
DFFAO00273 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.13□□□□□ -2.23
DFFAO00273 FTH1P12-201ENST00000432137 551 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC099677.2-201ENST00000436385 175 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms