Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC011451.2-201ENST00000604303 598 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 SNORD114-14-201ENST00000362723 75 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 SNORD115-2-201ENST00000362842 82 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 MTND1P14-201ENST00000427400 950 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 FABP5P14-201ENST00000437273 393 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 ELOCP30-201ENST00000447108 299 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 RNU7-90P-201ENST00000459216 62 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC109445.1-201ENST00000512356 383 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC134698.4-201ENST00000523451 826 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AP003168.1-201ENST00000530091 307 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC122134.1-202ENST00000569111 1201 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC112220.2-201ENST00000605513 533 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC016597.2-201ENST00000613256 341 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 RNU6-228P-201ENST00000362700 106 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 RNU6-480P-201ENST00000384332 107 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 SNORA12-201ENST00000391162 147 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 MIR1262-201ENST00000408276 93 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 RNU4-46P-201ENST00000410818 138 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC244098.3-201ENST00000424803 96 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AP001324.2-201ENST00000461163 319 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 MRPS17P3-201ENST00000465453 385 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL6A5A8TX70 DEFB130C-202ENST00000530001 230 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 MIR3664-201ENST00000579074 99 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 U8.5-201ENST00000364528 136 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 RNU4-66P-201ENST00000365199 138 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
COL6A5A8TX70 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 MIR643-201ENST00000385267 97 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AL606662.1-201ENST00000445763 553 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 snoU13.13-201ENST00000458842 104 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC092470.1-201ENST00000546187 132 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC025678.1-201ENST00000567861 338 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC138869.1-201ENST00000568623 124 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AP000403.1-201ENST00000603349 851 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 AC008993.2-201ENST00000631744 806 ntBASIC-0.38□□□□□ -2.47
COL6A5A8TX70 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
COL6A5A8TX70 RNU6-486P-201ENST00000363116 107 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 RNU6-343P-201ENST00000364709 104 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 MTND2P24-201ENST00000453434 806 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.39□□□□□ -2.47
COL6A5A8TX70 MIR4306-201ENST00000583390 91 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 RNU6-925P-201ENST00000384629 104 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 SNORA3B-201ENST00000391305 131 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AL603865.2-201ENST00000401679 213 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AL591034.2-201ENST00000402839 359 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 TIMM9P1-201ENST00000436122 256 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 CECR9-201ENST00000453421 199 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 RNA5SP269-201ENST00000459032 137 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AC064807.4-201ENST00000607201 407 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AC004775.1-201ENST00000607389 753 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 AC117490.2-201ENST00000610042 594 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.39□□□□□ -2.47
COL6A5A8TX70 RNU6-312P-201ENST00000364629 107 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 SEPT7P5-201ENST00000434048 306 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 SEPT7P4-201ENST00000437076 306 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC092170.1-201ENST00000440211 356 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 BUD31P2-201ENST00000449374 300 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC048334.1-201ENST00000477975 159 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 RNU6-118P-201ENST00000516552 102 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 RNU6-586P-201ENST00000517265 104 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC005176.2-201ENST00000596933 147 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AL391813.1-201ENST00000603098 260 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC119751.3-201ENST00000399720 670 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL6A5A8TX70 SNORA31.2-201ENST00000516019 134 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 NACAP3-201ENST00000552100 481 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 MIR3139-201ENST00000579145 76 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 AL670379.3-201ENST00000605040 251 ntBASIC-0.4□□□□□ -2.47
COL6A5A8TX70 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 RNU6-296P-201ENST00000384608 107 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AL139098.1-201ENST00000407291 389 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 USP9YP19-201ENST00000412165 485 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AC016831.2-201ENST00000417179 352 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL6A5A8TX70 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL6A5A8TX70 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.41□□□□□ -2.47
COL6A5A8TX70 AL136363.2-201ENST00000604173 851 ntBASIC-0.41□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms