Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AL590556.1-201ENST00000423231 483 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RBMX2P4-201ENST00000441256 376 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RNU6-329P-201ENST00000459618 107 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RPL31P58-201ENST00000469001 379 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC104564.1-201ENST00000493028 407 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC145146.1-201ENST00000496370 254 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC016632.1-201ENST00000503994 196 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RNU6-566P-201ENST00000516790 107 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP454-201ENST00000517231 127 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 MRPS36P4-201ENST00000534436 298 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 MIR4790-201ENST00000577799 79 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AL078605.1-201ENST00000603529 500 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC019193.3-201ENST00000609144 554 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 MIR6128-201ENST00000615528 109 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 SNORA43.4-201ENST00000629559 138 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.135-201ENST00000363439 95 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.301-201ENST00000364990 103 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 SNORA67.4-201ENST00000384688 142 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 RNU6-510P-201ENST00000391239 108 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AL359511.1-201ENST00000402970 211 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AL513328.1-201ENST00000446460 224 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 snoU13.6-201ENST00000458785 104 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 PTP4A1P4-201ENST00000512479 322 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 HSPE1P18-201ENST00000517602 280 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AP005639.2-201ENST00000527592 928 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AC087241.2-201ENST00000535801 324 ntBASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-3A6NJ46 RNU4-15P-201ENST00000362613 141 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RNU6-1283P-201ENST00000365314 105 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RNU6-767P-201ENST00000384132 107 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.473-201ENST00000384333 102 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 MIR548F5-201ENST00000408421 86 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RN7SKP158-201ENST00000410453 326 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RN7SKP61-201ENST00000410642 295 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 MTND3P8-201ENST00000412909 339 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RPL23AP95-201ENST00000426806 265 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL133396.1-201ENST00000432048 687 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL645568.3-201ENST00000433683 316 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC009238.1-201ENST00000442165 424 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL353572.1-201ENST00000442490 417 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC009237.6-201ENST00000446969 424 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC021146.2-201ENST00000504736 556 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 PRDX4P1-201ENST00000507189 574 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 RNU7-30P-201ENST00000516835 62 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC021269.2-201ENST00000532318 330 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 CPDP1-201ENST00000579660 283 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 POLR3GP2-201ENST00000588366 668 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 SNORD14A-201ENST00000606526 91 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL133215.3-201ENST00000609801 448 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL161423.1-201ENST00000613700 262 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 CTSLP2-204ENST00000629029 392 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AL450472.1-202ENST00000637286 180 ntBASIC2.03□□□□□ -2.08
NKX6-3A6NJ46 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.09
NKX6-3A6NJ46 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 AC069528.2-201ENST00000624849 1991 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 Y_RNA.72-201ENST00000362894 103 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 RNU6-1059P-201ENST00000363752 98 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 RNU4-56P-201ENST00000364700 142 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 MIR518C-201ENST00000384822 101 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 AC078809.1-201ENST00000427601 140 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 PMCHL2-203ENST00000457791 237 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 AC114801.2-201ENST00000503825 781 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 AC005668.1-201ENST00000571142 476 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 Z98751.3-201ENST00000604447 521 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 MIR8076-201ENST00000611401 83 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 IGHVIII-44-202ENST00000636235 289 ntBASIC2.02□□□□□ -2.09
NKX6-3A6NJ46 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms