Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNU6-229P-201ENST00000516614 102 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC011979.2-201ENST00000527568 352 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 DEFB131E-202ENST00000602581 683 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AL929325.1-201ENST00000603096 117 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC097372.5-201ENST00000623665 376 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC103706.2-201ENST00000638080 240 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 MTND4P14-201ENST00000435799 1354 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 Y_RNA.132-201ENST00000363421 102 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU5E-7P-201ENST00000365290 117 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-950P-201ENST00000384651 107 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 USP9YP11-201ENST00000427537 717 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AL163973.1-201ENST00000484753 577 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AC113347.3-201ENST00000509113 148 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 MTND2P7-201ENST00000521337 640 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 ZNF321P-202ENST00000550843 495 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AC087883.1-201ENST00000551882 391 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 MTATP6P3-201ENST00000581686 676 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 FAM106DP-201ENST00000586416 501 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AC016727.2-201ENST00000603988 621 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AL359547.2-201ENST00000615810 418 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AC116165.2-201ENST00000616705 206 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR338-201ENST00000636369 67 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 AL442644.1-201ENST00000454390 3105 ntBASIC0.2□□□□□ -2.38
TRBV27A0A0K0K1C4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-462P-201ENST00000362659 105 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU4-56P-201ENST00000364700 142 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-224P-201ENST00000384055 107 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-505P-201ENST00000384427 107 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR23A-201ENST00000385245 73 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RPL21P1-201ENST00000399532 476 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 HIGD1AP15-201ENST00000416198 280 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 MTND4P3-201ENST00000417829 541 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AL606662.1-201ENST00000445763 553 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU7-21P-201ENST00000459430 62 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC104982.1-201ENST00000478775 574 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC108729.3-201ENST00000513484 108 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1028P-201ENST00000517164 93 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC007834.2-201ENST00000536310 343 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 TPRKBP2-201ENST00000565969 475 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 BNIP3P26-201ENST00000600827 554 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AL606834.3-201ENST00000602615 496 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AL596327.1-201ENST00000603629 213 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 AC244015.1-201ENST00000622301 99 ntBASIC0.19□□□□□ -2.38
TRBV27A0A0K0K1C4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 U3.9-201ENST00000363823 204 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR578-201ENST00000384828 96 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 RNA5SP201-201ENST00000410316 124 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AL590135.1-201ENST00000422215 156 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC019205.3-201ENST00000424573 156 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC098934.3-201ENST00000430450 190 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC016700.2-201ENST00000446011 156 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU7-90P-201ENST00000459216 62 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC015911.1-201ENST00000495111 156 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AP002453.2-201ENST00000533503 320 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AC136443.5-201ENST00000603741 370 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 AL360219.1-201ENST00000610230 366 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 CASC19-280ENST00000642102 1351 ntBASIC0.18□□□□□ -2.38
TRBV27A0A0K0K1C4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 SNORA33-201ENST00000363664 130 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-1235P-201ENST00000384559 107 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 USP9YP21-201ENST00000420603 432 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AL117351.1-201ENST00000438864 766 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-498P-201ENST00000459468 107 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC067942.3-201ENST00000512025 362 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC109445.1-201ENST00000512356 383 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-947P-201ENST00000516264 106 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 RN7SKP12-201ENST00000516275 143 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR3923-201ENST00000579521 83 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR4781-201ENST00000585250 76 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC008752.3-201ENST00000588113 712 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AL158032.1-201ENST00000605401 106 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 AC106754.2-201ENST00000623006 233 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 MIR5087-201ENST00000635826 76 ntBASIC0.17□□□□□ -2.38
TRBV27A0A0K0K1C4 OR4G1P-203ENST00000641984 1631 ntBASIC0.16□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU1-76P-201ENST00000362903 159 ntBASIC0.16□□□□□ -2.38
TRBV27A0A0K0K1C4 RNA5SP109-201ENST00000391010 116 ntBASIC0.16□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms