Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-43P-201ENST00000384302 107 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.480-201ENST00000384364 102 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.481-201ENST00000384373 102 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RNU1-148P-201ENST00000384472 162 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SNORA12-201ENST00000391162 147 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 HMGN2P19-201ENST00000425149 265 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL591043.1-201ENST00000432461 424 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL645568.3-201ENST00000433683 316 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SEPT14P3-201ENST00000439401 183 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL732372.2-207ENST00000445840 183 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SEPT14P2-201ENST00000453405 183 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL441985.1-201ENST00000457727 251 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 HMGN2P26-201ENST00000463169 339 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RPL22P13-201ENST00000493291 347 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 MTCYBP18-201ENST00000501056 747 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AK3P2-201ENST00000507976 429 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SEPT14P4-201ENST00000513445 186 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RNU5F-2P-201ENST00000516066 82 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1332P-201ENST00000516666 104 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-965P-201ENST00000516721 96 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SNORA31.16-201ENST00000516773 139 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 FO082796.1-201ENST00000523795 183 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AL162413.1-201ENST00000603198 110 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC012493.3-201ENST00000604494 112 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 MIR502-201ENST00000606349 86 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC090617.10-201ENST00000624308 134 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC090517.3-201ENST00000625170 141 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 MIR203B-201ENST00000636080 86 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 AC073869.6-201ENST00000640656 341 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.89-201ENST00000363031 102 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1285P-201ENST00000363480 105 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-534P-201ENST00000364877 106 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RPS29P13-201ENST00000402041 169 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RNU2-48P-201ENST00000410694 191 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL590632.1-201ENST00000424289 371 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL365400.1-201ENST00000431854 640 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 SNAP23P1-201ENST00000433229 246 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 ERLEC1P1-201ENST00000433806 578 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 HMGB1P18-201ENST00000438801 619 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC012308.1-201ENST00000451232 178 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AMD1P1-201ENST00000457220 922 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RNU7-66P-201ENST00000459469 62 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RPS29P25-201ENST00000481709 171 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.654-201ENST00000497848 106 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 MIR449C-201ENST00000516047 92 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 SNORD60.2-201ENST00000516883 86 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL157687.1-201ENST00000554853 619 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL133241.1-201ENST00000556832 487 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL078605.1-201ENST00000603529 500 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AP000942.3-201ENST00000603702 160 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC084782.3-201ENST00000612282 578 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC073534.2-201ENST00000620377 381 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AC098679.4-201ENST00000624241 654 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 MIR3688-2-201ENST00000636963 87 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 AL450472.1-202ENST00000637286 180 ntBASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-655P-201ENST00000362858 107 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-254P-201ENST00000363377 107 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNY4P14-201ENST00000363656 96 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.402-201ENST00000383972 102 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNU1-52P-201ENST00000384190 164 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 MIR181A1-201ENST00000385026 110 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AL355497.1-201ENST00000406262 551 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNA5SP390-201ENST00000410191 113 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.599-201ENST00000410489 109 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 IFNA20P-201ENST00000436840 528 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AL161788.1-201ENST00000441805 169 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms