Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 MTND4P14-201ENST00000435799 1354 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 Y_RNA.30-201ENST00000362572 97 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 RNU4-67P-201ENST00000364569 141 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 MIR942-201ENST00000401111 86 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 MTCO3P41-201ENST00000414801 328 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 COX6CP10-201ENST00000416832 224 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AL953862.1-201ENST00000423016 168 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC113410.1-201ENST00000505029 247 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC091435.1-201ENST00000505442 584 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 AL138726.1-201ENST00000614873 333 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 SCARNA4-202ENST00000625402 129 ntBASIC0.22□□□□□ -2.37
TRAV17A0A0B4J275 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 MIR412-201ENST00000362142 91 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 RNU6-1285P-201ENST00000363480 105 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 SMIM11P1-201ENST00000369586 178 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 MIR1305-201ENST00000408300 86 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 RNA5SP111-201ENST00000411386 101 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 AL359704.1-201ENST00000411586 781 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 TIMM9P2-201ENST00000419324 266 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 MRPS36P1-201ENST00000421291 307 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 AC010587.2-201ENST00000511727 448 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 APOOP3-201ENST00000536787 586 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 AC068620.3-201ENST00000602749 560 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 AC026741.1-201ENST00000605892 482 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 MIR15A-201ENST00000607334 83 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
TRAV17A0A0B4J275 RNA5SP257-201ENST00000363023 116 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 RNU6-236P-201ENST00000363886 106 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 SNORA32.2-201ENST00000384049 122 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 GAPDHP17-201ENST00000449858 1001 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 ART2BP-201ENST00000453501 499 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AL139824.2-201ENST00000458731 1095 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 SUMO2P5-201ENST00000506790 245 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 Y_RNA.687-201ENST00000516558 91 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 SNORA59B-202ENST00000578183 701 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 MIR5695-201ENST00000579717 85 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AL353778.1-201ENST00000603149 408 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 CTHRC1P1-201ENST00000605383 469 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AL353149.1-201ENST00000610667 244 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 AC099654.8-201ENST00000637757 681 ntBASIC0.2□□□□□ -2.38
TRAV17A0A0B4J275 SNORD56.1-201ENST00000362913 68 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 Y_RNA.251-201ENST00000364551 99 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 Y_RNA.374-201ENST00000365606 101 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 SNORA80D-201ENST00000384488 135 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 RN7SKP200-201ENST00000410564 320 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 MTCO1P27-201ENST00000448269 226 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC016925.1-201ENST00000458303 298 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC010531.2-201ENST00000465012 153 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC119751.4-201ENST00000507498 357 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 LRRC34P2-201ENST00000514850 553 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 SUMO2P16-201ENST00000519475 264 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AL136520.1-202ENST00000555494 763 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 MIR3136-201ENST00000583498 78 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC004987.4-201ENST00000603383 338 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC174048.1-201ENST00000603389 144 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AL158163.2-201ENST00000619110 700 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 RMST_7.1-201ENST00000621935 268 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 AC073544.1-201ENST00000600110 1595 ntBASIC0.19□□□□□ -2.38
TRAV17A0A0B4J275 RNU5A-8P-201ENST00000364102 114 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 RNU6-45P-201ENST00000384471 107 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 MIR10A-201ENST00000385043 110 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 EEF1E1P1-201ENST00000446998 430 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 MTND2P30-201ENST00000456663 382 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 AC104982.1-201ENST00000478775 574 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 MTCO3P9-201ENST00000506989 781 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 RN7SKP12-201ENST00000516275 143 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 AC023050.2-201ENST00000544968 387 ntBASIC0.18□□□□□ -2.38
TRAV17A0A0B4J275 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms