Protein–RNA interactions for Protein: S4R1R7

Rpl9-ps1, MCG50795, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps1S4R1R7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rpl9-ps1S4R1R7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpl9-ps1S4R1R7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm27867-201ENSMUST00000184778 125 ntBASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpl9-ps1S4R1R7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpl9-ps1S4R1R7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm25745-201ENSMUST00000174945 133 ntBASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.71■□□□□ 0.27
Rpl9-ps1S4R1R7 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms