Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.53□□□□□ -0.08
H2afb3S4R1G7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb3S4R1G7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Gm44450-201ENSMUST00000199528 114 ntBASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Gm7213-201ENSMUST00000215977 950 ntBASIC14.52□□□□□ -0.09
H2afb3S4R1G7 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.52□□□□□ -0.09
H2afb3S4R1G7 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb3S4R1G7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Gm37055-201ENSMUST00000191866 133 ntBASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb3S4R1G7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Gm11336-201ENSMUST00000118168 334 ntBASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Gm18421-201ENSMUST00000204122 625 ntBASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms