Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb1S4R1E0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb1S4R1E0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gm11539-201ENSMUST00000119837 557 ntBASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.62□□□□□ -0.07
H2afb1S4R1E0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afb1S4R1E0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms