Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.34■□□□□ 0.21
Crlf3Q9Z2L7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf3Q9Z2L7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf3Q9Z2L7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf3Q9Z2L7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Crlf3Q9Z2L7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crlf3Q9Z2L7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crlf3Q9Z2L7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Crlf3Q9Z2L7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Crlf3Q9Z2L7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Crlf3Q9Z2L7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Il3ra-202ENSMUST00000223589 738 ntBASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Crlf3Q9Z2L7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crlf3Q9Z2L7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crlf3Q9Z2L7 Gm12085-201ENSMUST00000119263 940 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 544.2 ms