Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Mir6404-201ENSMUST00000183699 94 ntBASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmg20bQ9Z104 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmg20bQ9Z104 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmg20bQ9Z104 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmg20bQ9Z104 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Gm13312-201ENSMUST00000119631 718 ntBASIC19■□□□□ 0.63
Hmg20bQ9Z104 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmg20bQ9Z104 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmg20bQ9Z104 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20bQ9Z104 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20bQ9Z104 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20bQ9Z104 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmg20bQ9Z104 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms