Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm12350-201ENSMUST00000121208 462 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm37935-201ENSMUST00000192012 982 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1h3Q9Z0Y9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h3Q9Z0Y9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h3Q9Z0Y9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h3Q9Z0Y9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms