Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn3Q9Z0G9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn3Q9Z0G9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn3Q9Z0G9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn3Q9Z0G9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn3Q9Z0G9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Gm15794-201ENSMUST00000120182 631 ntBASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn3Q9Z0G9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn3Q9Z0G9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms