Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.71□□□□□ -0.21
Col13a1Q9R1N9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col13a1Q9R1N9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Gm13418-201ENSMUST00000119097 944 ntBASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Gm9727-201ENSMUST00000161387 555 ntBASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.7□□□□□ -0.22
Col13a1Q9R1N9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Gm14140-201ENSMUST00000119999 995 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col13a1Q9R1N9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Gm25990-201ENSMUST00000102440 86 ntBASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Gm7230-201ENSMUST00000173026 815 ntBASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col13a1Q9R1N9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms