Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RpgrQ9R0X5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RpgrQ9R0X5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RpgrQ9R0X5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Gm22697-201ENSMUST00000175194 63 ntBASIC16.39■□□□□ 0.21
RpgrQ9R0X5 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RpgrQ9R0X5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.38■□□□□ 0.21
RpgrQ9R0X5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms