Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.71□□□□□ -0.37
Tnfrsf13bQ9ET35 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf13bQ9ET35 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.71□□□□□ -0.37
Tnfrsf13bQ9ET35 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf13bQ9ET35 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf13bQ9ET35 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.7□□□□□ -0.38
Tnfrsf13bQ9ET35 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Gm18421-201ENSMUST00000204122 625 ntBASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf13bQ9ET35 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf13bQ9ET35 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms