Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-4Q9EQM3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-4Q9EQM3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Gm25948-201ENSMUST00000175334 112 ntBASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-4Q9EQM3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-4Q9EQM3 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm15427-201ENSMUST00000117288 531 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Gm45747-201ENSMUST00000212203 999 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nkx2-4Q9EQM3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms