Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lonrf3Q9D4H7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lonrf3Q9D4H7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44357-201ENSMUST00000195897 142 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm19658-201ENSMUST00000196231 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44367-201ENSMUST00000196836 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44350-201ENSMUST00000197197 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44390-201ENSMUST00000197533 144 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44313-201ENSMUST00000198018 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44486-201ENSMUST00000198508 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44314-201ENSMUST00000199263 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44394-201ENSMUST00000199558 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44484-201ENSMUST00000199873 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44466-201ENSMUST00000200264 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm44359-201ENSMUST00000200671 138 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lonrf3Q9D4H7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Mir8098-201ENSMUST00000184011 137 ntBASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Gm28659-201ENSMUST00000188013 759 ntBASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Mzt1-203ENSMUST00000227948 952 ntBASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf3Q9D4H7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Lonrf3Q9D4H7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf3Q9D4H7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lonrf3Q9D4H7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms