Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Upk1aQ9D132 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.29■□□□□ 0.04
Upk1aQ9D132 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Gm18421-201ENSMUST00000204122 625 ntBASIC15.29■□□□□ 0.04
Upk1aQ9D132 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Upk1aQ9D132 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Upk1aQ9D132 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Upk1aQ9D132 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Gm21814-202ENSMUST00000203277 873 ntBASIC15.27■□□□□ 0.04
Upk1aQ9D132 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.27■□□□□ 0.04
Upk1aQ9D132 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Upk1aQ9D132 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1aQ9D132 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.26■□□□□ 0.03
Upk1aQ9D132 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1aQ9D132 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms