Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpusd4Q9CWX4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Gm18032-201ENSMUST00000222541 538 ntBASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpusd4Q9CWX4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpusd4Q9CWX4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Mir1668-201ENSMUST00000184114 107 ntBASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Gm7977-201ENSMUST00000193787 748 ntBASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpusd4Q9CWX4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpusd4Q9CWX4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms