Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gm17968-201ENSMUST00000194902 784 ntBASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Gm20949-201ENSMUST00000206478 952 ntBASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cldnd1Q9CQX5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldnd1Q9CQX5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cldnd1Q9CQX5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cldnd1Q9CQX5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.46■□□□□ 0.22
Cldnd1Q9CQX5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Gm8344-201ENSMUST00000119813 856 ntBASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Cldnd1Q9CQX5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Gm5312-201ENSMUST00000203728 547 ntBASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Cldnd1Q9CQX5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms