Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rer1Q9CQU3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Mir5130-201ENSMUST00000175160 84 ntBASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Gm29707-201ENSMUST00000196325 491 ntBASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rer1Q9CQU3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.21□□□□□ -0.3
Rer1Q9CQU3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rer1Q9CQU3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rer1Q9CQU3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rer1Q9CQU3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rer1Q9CQU3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Gm26039-201ENSMUST00000158152 144 ntBASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rer1Q9CQU3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Mir1668-201ENSMUST00000184114 107 ntBASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms