Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm7Q9CQQ8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Gm12497-201ENSMUST00000138778 237 ntBASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm7Q9CQQ8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Gm7506-201ENSMUST00000207758 815 ntBASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm7Q9CQQ8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Gm13216-201ENSMUST00000117145 591 ntBASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Gm44771-201ENSMUST00000206975 626 ntBASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm7Q9CQQ8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Mir6404-201ENSMUST00000183699 94 ntBASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lsm7Q9CQQ8 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms