Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.56■□□□□ 0.88
Rtn4Q99P72 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Gm18115-201ENSMUST00000221209 621 ntBASIC20.56■□□□□ 0.88
Rtn4Q99P72 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Gm42651-201ENSMUST00000199851 1339 ntBASIC20.55■□□□□ 0.88
Rtn4Q99P72 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4Q99P72 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4Q99P72 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Gm13263-201ENSMUST00000121271 838 ntBASIC20.53■□□□□ 0.88
Rtn4Q99P72 Gm34391-201ENSMUST00000203706 907 ntBASIC20.53■□□□□ 0.88
Rtn4Q99P72 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.53■□□□□ 0.88
Rtn4Q99P72 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.53■□□□□ 0.88
Rtn4Q99P72 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Gm44450-201ENSMUST00000199528 114 ntBASIC20.52■□□□□ 0.88
Rtn4Q99P72 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4Q99P72 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rtn4Q99P72 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.51■□□□□ 0.87
Rtn4Q99P72 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Rtn4Q99P72 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms