Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndc1Q8VCB1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ndc1Q8VCB1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ndc1Q8VCB1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndc1Q8VCB1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndc1Q8VCB1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Gm13884-201ENSMUST00000118103 829 ntBASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Gm27867-201ENSMUST00000184778 125 ntBASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndc1Q8VCB1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Gm11452-201ENSMUST00000122376 690 ntBASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Gm44454-201ENSMUST00000198541 138 ntBASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Gm44771-201ENSMUST00000206975 626 ntBASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndc1Q8VCB1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms