Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chrna3Q8R4G9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.81■□□□□ 0.12
Chrna3Q8R4G9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chrna3Q8R4G9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna3Q8R4G9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms