Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1aQ8CIG0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Mir5126-201ENSMUST00000175513 77 ntBASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Gm6443-201ENSMUST00000203599 874 ntBASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Haglr-201ENSMUST00000100000 2085 ntBASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1aQ8CIG0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Depdc1aQ8CIG0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1aQ8CIG0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1aQ8CIG0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1aQ8CIG0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1aQ8CIG0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1aQ8CIG0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Depdc1aQ8CIG0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Depdc1aQ8CIG0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1aQ8CIG0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1aQ8CIG0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Depdc1aQ8CIG0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms