Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Gm37025-201ENSMUST00000195159 829 ntBASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Gm18671-201ENSMUST00000214826 683 ntBASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco1Q8CEZ1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco1Q8CEZ1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco1Q8CEZ1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Gm26524-201ENSMUST00000192339 390 ntBASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco1Q8CEZ1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Rab3c-203ENSMUST00000224180 967 ntBASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smco1Q8CEZ1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms