Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim52Q8CDV4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim52Q8CDV4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.83■□□□□ 0.77
Trim52Q8CDV4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Gm10175-201ENSMUST00000086013 645 ntBASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim52Q8CDV4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim52Q8CDV4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Gm2213-201ENSMUST00000197485 688 ntBASIC19.82■□□□□ 0.76
Trim52Q8CDV4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Gm45167-201ENSMUST00000208007 322 ntBASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim52Q8CDV4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim52Q8CDV4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms